| Id Trinity | TRINITY_DN49414_c2_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_353985 |
| Sequence | TGATCGTCTTTCCATCAGGTAAGGGTTTCACTTGGAATAGTTCCTGCAAAAGCACAACATGTGTTCAAAGGGTTAATTTGATTGAGAGAGTGATTAGTAA TTAGGAGAGAAAAGAAAAGGGAAAGACATTCTTTATTCTAATTTTTCCACATGAGAACAGCATAAGCCATATGAAACCAGTTTATATACATATTAAGGCT AACATCCTTAAACTCTTCAAAAGCTACATCAAAGGAGATTATACCTTAACGTAACATTTTATGTCATTTCTAATCAACTTCTTGTTCATGAGGCCGATCA AGGATGCTCCAATTGGTTTGATTTGATTGATCTAAACAGACGTAAAATGGTTTTTTTCCAAAGTCATGCAAGTAGGTGTACAAAATTATAATGGTGTTTT ATAGTGACATTTTTATGATAATGGTTAGATCCAAATGTTTGAAGTTTTATTACTGACTGAAATTAGTTTTCAGGTATGAGCGCGAAGATGAACCCAATAT GCTTGCTCCAGTGGATGTATTTGTTAGTACTGTGGATCCCATGAAGGAACCTCCTTTGGTTACAGCAAACACTGTTCTTTCAATCTTGGCCATGGATTAC CCTGTTGAAAAGATATCATGCTACATATCTGATGATGGAGCTTCAATGTGCACATTTGAATCCCTATCAGAAACTGCAGAGTTTGCTAGGAAATGGGTAC CATTTTGTAAGAAATTTTCTATAGAGCCTAGAGCACCTGAGATGTACTTCTCTGAGAAGGTTGACTATCTAAAGGACAAGGTGCAAGCCACCTTCGTTAA GGAGCGTCGAGCTATGAAGAGAGAATATGAAGAGTTTAAGGTTAGGATCAATGCACTAGTTGCAAAAGCCCAGAAGGTTCCCGAAGGAGGGTGGATCATG CAGGATGGGACACCATGGCCAGGGAACAACACCAAGGATCATCCGGGCATGATTCAAGTCTTTCTCGGTACCAGTGGAGGTCTTGATACTGAAGGAAACC AGCTTCCTCGCCTCGTTTATGTTTCACGAGAGAAAAGGCCTGGTTTTCAACACCACAAGAAAGCTGGTGCCATGAATGCTCTGGTTCGTGTGTCTGCTGT C BLAST |
| Tissue | pods |
| Gene name | LI_gene_169129; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_353985
| Blastp | Probable cellulose synthase A catalytic subunit 2 [UDP-forming] from Oryza sativa with 88.5% of identity |
|---|---|
| Blastx | Probable cellulose synthase A catalytic subunit 2 [UDP-forming] from Oryza sativa with 85.98% of identity |
| Eggnog | Glycosyl transferase, family 2(COG1215) |
| Kegg | Link to kegg annotations (4334515) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415364.1) |
| Pfam | Cellulose synthase (PF03552.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |