Ll_transcript_353978

• Id Trinity: TRINITY_DN49414_c2_g1_i4
• Name Transcript: Ll_transcript_353978
• Sequence: CATCACTCTTATGTGGACACATAACACATTAGGTGTGGAATGTGAACACACACTAACCTCTTCAAACAAACTGCACCAATTTTCCTTCTTAAAATACAAC CCTTTTTCATCTCTCAACCTCACCAAATATCACACACTCTTGTGTTCTTTTTTATATTGCATTGTCATATTCAACAAGTTACCAGCAATGGAAGCCAGTG CTGGACTTGTTGCTGGCTCTCACAACCGAAACGAGCTTGTAGTCATTCATGGACATGAAGAGCACAAGCCATTGAAGAACTTGGATGGCCAGGTTTGCGA GATTTGTGGCGATGGCGTGGGACTCACGGTGGATGGAGATTTGTTTGTGGCTTGTAATGAGTGTGGTTTTCCGGTGTGTCGACCGTGCTATGAATACGAA AGGAGAGAAGGGAGCCAGCTTTGCCCACAGTGCAAAACTAGATACAAGCGTCTCAAAGGGAGCCCGCGGGTTCAGGGAGATGAAGAAGAAGAGGGTGTGG ATGATATTGAGCATGAATTTAAAATTGATGACCAAATGAACAAGCATGGCTATGTTGCAGAAGCCATGCTACATGGAAAAATGAGCTATGGAAGAGGTCC TGAAGATGATGAGCATTCCCAATTTCCACCTGTTATTTCTGGTGGTCGTTCTAGGCCTGTGAGTGGAGAGATATCAGTAGCTTCTCATGGTTATGGGGAC CAGATGTTATCATCCTCGATGCATAAACGAGTGCATCCGTATCCGATGTCCGAACCAGGAAGTGCAAGATGGGATGAAAAGAAAGATGATGAATGGAAAG ACAGAATGGATGAGTGGAAATTGCAGCAAGGAAATTTGGGACCTGAACCTGATGAAGATCAAGATGCAGCTATGTTTGATGAAGCAAGACAACCACTGTC CAGGAAAGTTCCAATAGCCTCTAGCAAAGTCAATCCATATAGGATGGTGATTGTTGCGCGGCTTGTGATTCTCGCTTTCTTCTTCCGATATAGAATTTTG AACCCGGTACATGATGCAATGGGGCTATGGCTAACCTCTATTGTATGTGAAATCTGGTTTGCTTTTTCATGGATTCTTGATCAGTTTCCGAAATGGTTTC CCATCGAACGAGAGACCTACCTTGATCGTCTTTCCATCAGGTATGAGCGCGAAGATGAACCCAATATGCTTGCTCCAGTGGATGTATTTGTTAGTACTGT GGATCCCATGAAGGAACCTCCTTTGGTTACAGCAAACACTGTTCTTTCAATCTTGGCCATGGATTACCCTGTTGAAAAGATATCATGCTACATATCTGAT GATGGAGCTTCAATGTGCACATTTGAATCCCTATCAGAAACTGCAGAGTTTGCTAGGAAATGGGTACCATTTTGTAAGAAATTTTCTATAGAGCCTAGAG CACCTGAGATGTACTTCTCTGAGAAGGTTGACTATCTAAAGGACAAGGTGCAAGCCACCTTCGTTAAGGAGCGTCGAGCTATGAAGAGAGAATATGAAGA GTTTAAGGTTAGGATCAATGCACTAGTTGCAAAAGCCCAGAAGGTTCCCGAAGGAGGGTGGATCATGCAGGATGGGACACCATGGCCAGGGAACAACACC AAGGATCATCCGGGCATGATTCAAGTCTTTCTCGGTACCAGTGGAGGTCTTGATACTGAAGGAAACCAGCTTCCTCGCCTCGTTTATGTTTCACGAGAGA AAAGGCCTGGTTTTCAACACCACAAGAAAGCTGGTGCCATGAATGCTCTGGTTCGTGTGTCTGCTGTCCTCACAAATGCTCCTTTCATGTTGAACTTAGA TTGTGATCATTATGTCAATAACAGCAAGGCTGTCCGGGAGGCCATGTGCTTCTTGATGGACCCACAAACTGGGAAGAAGGTCTGCTATGTTCAGTTTCCT CAGAGATTCGATGGCATTGATGCACATGATCGTTATGCGAACAGGAATACAGTTTTCTTTGATATTAACATGAAGGGTCTGGATGGTATTCAGGGTCCAG TATATGTTGGCACAGGTTGTTGTTTCAGGAGGCAGGCTTTATATGGATATAATCCTCCCAAGGGTCCCAAGCGTCCGAAAATGGTAAGCTGTGACTGCTG CCCATGTTTTGGAAGCCGCAAGAAGCTTAAGCATGCAAAGAGTGATGCAAATGGAGAGGCTGCAAGTCTAAAAGGAATGGATGATGACAAAGAGATGCTG ATGTCTCATATGAATTTTGAGAAGAAATTTGGGCAGTCATCCATCTTTGTGACTTCAACCTTGATGGAGGAGGGTGGTGTACCTCCTTCCTCAAGTCCAG CAGGCCTTCTTAAAGAAGCCATTCATGTAATCAGCTGTGGGTATGAAGACAAAACTGAATGGGGACTAGAGCTTGGTTGGATCTATGGATCTATCACAGA GGATATTCTAACAGGTTTTAAGATGCACTGCCGCGGTTGGAGGTCTATTTACTGCAATCCAAAGAGAGCTGCATTCAAGGGTACTGCTCCTATCAACCTG TCAGATCGACTCAACCAGGTTCTTCGATGGGCCCTTGGTTCCATTGAGATCTTCTTCAGTCACCATAGCCCTTTATGGTATGGCTACAAGGAAGGGAAGC TAAAATGGCTTGAGAGATTTGCCTATGCAAACACAACTATCTACCCCTTCACCTCCATAGCTCTAGTTGCCTACTGTATTCTTCCTGCAGTTTGCTTGCT TACTGACAAATTCATCATGCCATCGGTAACAATTACATTCTAGCCCTCTTCCTGATAGGACTTCACAATGTTTTAAACTGTAGTTGTGGTTACTGCAATT GTGGTTATTATGGTTGTTGCGATGCAGATTGCAGTGTGAATTTGTTGTGATTAAGAAAATGTTTTTCAATTCGATGCTGCCTGATATGACTCAAATGTGG TCCGATGCAGTTACGCTATGTCCCGATGCGGCCACGTCATTCATTCTGATTCGATATTGCACTGCAATTGCTGTGTGATGTGGTCCGCAATTTGAAACAA TGGGAATTCAATTATACAATTCATGCTTATGCTTATGCTTATTTATTATGAAACTATGACATGCCACATTTCATAATATCCATCAAGACTACAAGATATA ATGTGAACCTAAACATCTTTCTTATGCAGCAGGACTTAACCCTTTTAATCATCAATCCATTATCACTAAAAATGCTAGGTCCTTCAATCCTTATTCAAAG TGCTAATAGAATTCATACATACCTCTTTGCTCATAATGCTAATTCTTGTTTTTCTTGGTGATGATCCAGATAAGCACTTTTGCTAGTTTGTACTTCATTG GTCTCTTCTCTTCAATCATCGCAACGGGCATTCTCGAGTTGAAATGGAGTGGAGTTAGCATTGAGGAATGGTGGAGAAATGAACAATTTTGGGTCATTGG TGGTGTATCAGCACATCTCTTTGCTGT
• Tissue: pods
• Gene name: LI_gene_169129;
• Additional information: details;

Expression of Ll_transcript_353978

FPKM

• PAB: 0
• PNAB: 2.8
• PS1: 0
• PS2: 3.1
• PS3: 1
• PW1: 0.2
• PW2: 10.1
• PW3: 25.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_353978

• Blastp: Cellulose synthase A catalytic subunit 7 [UDP-forming] from Arabidopsis with 83.16% of identity
• Blastx: Cellulose synthase A catalytic subunit 7 [UDP-forming] from Arabidopsis with 82.8% of identity
• Eggnog: Glycosyl transferase, family 2(COG1215)
• Kegg: Link to kegg annotations (AT5G17420)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417209.1)
• Pfam: Zinc-binding RING-finger (PF14569.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;