Ll_transcript_353981

• Id Trinity: TRINITY_DN49414_c2_g1_i7
• Name Transcript: Ll_transcript_353981
• Sequence: GAAAGAAGGAAGCTCCCTCCACATGCACAACAACGTTAGTTGTTGGAGATGGCTTGCTTGAAGACCATGGTGGTTGGAAAATACACAAACCTTAGCTTAG CTTTAAGGCAATGGTGACACTACAACCAACACCATCCATCACTCTTATGTGTACACAAACACATACCAATTCATGCAAAGAAAAAAGCACCAATCTTCCT TCATAAAGCACCACTAACATTTCCATCTTTCAACTTCATCATATATCACAAACACACCCTTGTGTTTCATTATTCTATTGACCCATTACCAACTCAACAT GGAAGCTAGTGCTGGACTAGTTGCTGGCTCTCACAACCGCAATGAGCTTGTTGTTATTCATGGCCATGAAGAGCACAAGCCATTGAAGAACTTGGATGGT CAAGTGTGTGAGATTTGTGGTGATGGGGTGGGACTCACGGTGGATGGAGACTTGTTTGTGGCCTGTAATGAGTGCGGTTTTCCGGTGTGCCGGCCGTGCT ATGAATATGAAAGGAGAGAGGGGAGCCAACTTTGCCCACAGTGCAAGACTAGATACAAGCGTCTCAAAGGGAGCCTGCGGGTTCAAGGAGATGAAGATGA AGAGGACGTGGATGATATCGAGCATGAGTTTAATATTGAGGACCAAAAGAACAAGCATGGCTATGTTGCAGAAGCCATGCTGCATGGAAAGATGAGCTAT GGAAGAGGTCTTGAAGATGATGAGCATTCTCAATTCCCACCTGTTATATCCGGCAATCATTCTAGGCCTGTAAGTGGAGAGTTATCAGTAGCATCTCATG GTTATGGGGACCAGATGTTAGCTTCTTCGTTGCATAAACGAGTGCATCCGTATCCGATGTCTGAACCAGGAAGTGCACAATGGGATGAAAAGAAAGAGGA TGGATGGAAAGACAGAATGGATGATTGGAAATTGCAGCAGGGCAATTTAGGACCTGAACCTGAAGAGGATCCAGATTCAGCTATGTTAGATGAAGCAAGA CAGCCACTGTCCAGGAAAATTCCAATAGCATCTAGCAAAGTCAATCCATATAGGATGGTGATTGTGGCGCGGCTCGTGATTCTTGCTTTCTTCTTCCGAT ACAGAATTTTGAACCCGGTACATGATGCAATGGGGCTATGGCTAACCTCTATTGTATGTGAAATCTGGTTTGCTTTTTCATGGATTCTTGATCAGTTTCC TAAATGGTTTCCGATCGAACGAGAGACCTACCTTGACCGTCTTTCAATCAGGTATGAGCGCGAAGATGAACCCAACATGCTTGCTCCTGTGGATGTCTTT GTTAGTACTGTGGATCCAATGAAGGAACCTCCTTTGGTTACAGCAAACACTGTTCTTTCAATCTTGGCCATGGATTACCCAGTTGAAAAGATATCATGCT ATATTTCTGATGATGGAGCTTCAATGTGCACATTTGAATCCTTATCAGAAACTGCAGAGTTTTCTAGAAAGTGGGTACCATTTTGTAAGAAATTTTCTAT AGAGCCTAGAGCACCTGAGATGTACTTCTCCGAGAAGATTGACTACCTAAAGGACAAGGTGCAACCCACCTTCGTTAAGGAACGGCGAGCTATGAAGAGA GAATATGAAGAGTTTAAGGTTAGGATCAATGCGCTTGTCGCAAAAGCGCAGAAGGTTCCTGAAGGAGGGTGGATCATGCAGGATGGGACACCATGGCCAG GGAACAACACCAAGGATCATCCTGGCATGATTCAAGTCTTTCTTGGCACCAGTGGAGGTCTTGATACTGAAGGAAACCAGCTTCCTCGCCTTGTCTATGT TTCACGAGAGAAAAGGCCTGGTTTTCAACACCACAAGAAAGCTGGTGCAATGAATGCTCTGGTTCGCGTGTCTGCAGTTCTCACAAATGCTCCTTTCATG TTGAACTTAGATTGTGATCATTATGTCAATAACAGCAAGGCTGCCCGGGAGGCCATGTGCTTCTTAATGGACCCGCAAACTGGGAAGAAGGTCTGCTATG TCCAGTTTCCTCAAAGATTTGACGGCATCGACACACATGATCGTTATGCTAACAGGAACACGGTTTTCTTTGATATTAACATGAAGGGTCTGGATGGTAT TCAGGGTCCAGTATATGTTGGCACAGGTTGTTGCTTCAGGAGGCAAGCTTTATATGGATATAATCCTCCCAAGGGTCCCAAGCGTCCGAAAATGGTAAGC TGTGACTGCTGCCCATGTTTTGGAAGCCGCAAGAAGCTTAAGCATGCAAAGAGTGATGCAAATGGACAGGCTGCAAGCCTACAAGGAATGGATGATGACA AAGAGATGCTGATGTCGCATATGAATTTCGAGAAGAAATTTGGGCAATCATCAATCTTTGTGACGTCAACGTTGATGGAAGAGGGTGGTGTACCTCCTTC CTCAAGTCCAGCAGGCCTTCTTAAAGAAGCCATTCATGTAATCAGCTGTGGATACGAAGACAAAACTGAATGGGGACTAGAGCTTGGTTGGATCTATGGA TCTATCACAGAGGATATTCTAACAGGTTTTAAGATGCACTGCCGCGGTTGGAGATCCATTTACTGCAATCCAAGGAGACCTGCATTCAAGGGAACTGCTC CTATCAACCTGTCCGATCGACTTAATCAGGTTCTTCGATGGGCACTTGGTTCCATTGAGATCTTCTTCAGTCACCATAGCCCTTTATGGTATGGATACAA GGAAGGGAAGCTAAAGTGGCTTGAGAGATTTGCCTATGCAAACACAACTATCTACCCCTTCACCTCCATAGCTCTAGTTGCCTACTGTATTCTTCCTGCA GTTTGCTTGCTTACTGACAAATTCATCATGCCATCGGTAACAATTACATTCTAGCCCTCTTCCTGATAGGACTTCACAATGTTTTAAACTGTAGTTGTGG TTACTGCAATTGTGGTTATTATGGTTGTTGCGATGCAGATTGCAGTGTGAATTTGTTGTGATTAAGAAAATGTTTTTCAATTCGATGCTGCCTGATATGA CTCAAATGTGGTCCGATGCAGTTACGCTATGTCCCGATGCGGCCACGTCATTCATTCTGATTCGATATTGCACTGCAATTGCTGTGTGATGTGGTCCGCA ATTTGAAACAATGGGAATTCAATTATACAATTCATGCTTATGCTTATGCTTATTTATTATGAAACTATGACATGCCACATTTCATAATATCCATCAAGAC TACAAGATATAATGTGAACCTAAACATCTTTCTTATGCAGCAGGACTTAACCCTTTTAATCATCAATCCATTATCACTAAAAATGCTAGGTCCTTCAATC CTTATTCAAAGTGCTAATAGAATTCATACATACCTCTTTGCTCATAATGCTAATTCTTGTTTTTCTTGGTGATGATCCAGATAAGCACTTTTGCTAGTTT GTACTTCATTGGTCTCTTCTCTTCAATCATCGCAACGGGCATTCTCGAGTTGAAATGGAGTGGAGTTAGCATTGAGGAATGGTGGAGAAATGAACAATTT TGGGTCATTGGTGGTGTATCAGCACATCTCTTTGCTGT
• Tissue: pods
• Gene name: LI_gene_169129;
• Additional information: details;

Expression of Ll_transcript_353981

FPKM

• PAB: 1
• PNAB: 0.9
• PS1: 0.2
• PS2: 0.4
• PS3: 0.8
• PW1: 0.9
• PW2: 0.5
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_353981

• Blastp: Cellulose synthase A catalytic subunit 7 [UDP-forming] from Arabidopsis with 83.63% of identity
• Blastx: Cellulose synthase A catalytic subunit 7 [UDP-forming] from Arabidopsis with 83.63% of identity
• Eggnog: Glycosyl transferase, family 2(COG1215)
• Kegg: Link to kegg annotations (AT5G17420)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415363.1)
• Pfam: Zinc-binding RING-finger (PF14569.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;