Id Trinity | TRINITY_DN49420_c2_g1_i7 |
---|---|
Name Transcript | Ll_transcript_355035 |
Sequence | TATGTTATCCTTCTTGCAGCGAGGGCTTCTAGGATTGAAAATCAGGATGCCATAGATGCTGCAATTGTTGGGATGCTTGCTGACCCAAAGGAGGTAAATG TGCCAAAACAATATTTCTTTCTAACATGAAACAGAAAGGGAAAAAATATATTGAATTTGCGATAAAGATCAAACATTCTAACATACTATGAATTGGCCAG GCACGGGCTGGTGCTAGGGAGGTCCACTTTCTCCCATTCAATCCCGTAGACAAGAGGACTGCTCTAACCTACATTGATTCTGATGGAAATTGGCATCGAT CTAGCAAAGGTGCTCCTGAGCAGATATTGAACCTCTGCAACTGCAAAGAGGATGTTAGGAAAAGGGCACATGCTACTATTGATAAGTTTGCTGAGCGTGG ATTGCGGTCTTTAGGTGTTGCTAGACAGGAAGTACCCGAGAAAACAAAAGAGAGTCCTGGTGCACCATGGCAATTTGTTGGTCTGCTACCACTGTTTGAT CCTCCCAGACATGATAGTGCTGAAACCATCACGAGAGCTCTGCACCTTGGTGTGAATGTTAAGATGATTACTGGGGATCAGCTTGCCATTGCCAAGGAAA CTGGTCGAAGGCTTGGGATGGGAACAAACATGTACCCGTCTTCTTCTTTGCTTGGCCAACACAAGGATCCTGCTATCGAAGCTCTTCCTGTTGATGAGTT GATCGAGAAGGCTGATGGATTCGCTGGAGTATTTCCTGAACACAAATATGAAATTGTTAAGAGGCTACAAGACAGGAAGCATATATGTGGAATGACAGGT GATGGTGTCAACGATGCCCCTGCATTAAAGAGGGCAGATATTGGTATTGCTGTTGCTGATGCTACAGATGCTGCTAGAAGTGCTTCTGACATTGTTCTCA CCGAACCTGGTTTGAGTGTCATTATTAGTGCAGTTCTCACTAGCAGGGCAATTTTCCAAAGGATGAAGAACTATACTATTTATGCTGTGTCAATCACCAT TCGTATTGT BLAST |
Tissue | pods |
Gene name | LI_gene_169198; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_355035
Blastp | Plasma membrane ATPase 2 from Lycopersicon with 92.57% of identity |
---|---|
Blastx | Plasma membrane ATPase from Oryza sativa with 89.63% of identity |
Eggnog | P-type atpase(COG0474) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416760.1) |
Pfam | haloacid dehalogenase-like hydrolase (PF00702.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |