Ll_transcript_354862

• Id Trinity: TRINITY_DN49425_c1_g1_i2
• Name Transcript: Ll_transcript_354862
• Sequence: TTCGTTTCTTTCCATTTTTTTTTTTTTTTCATTCTCTGAATATAATAATTACGTTTTTTCTTTGTTTTTCAGATGGCATGGATTCTCATCATTGCTTCTC TCATTTCTCTTTGGATCCTTTCTCTTTTCAAACTCCTCCTTTTCTCCCACTTCCCTTTTTCCAAACACTTCAACCATAAGGGTCTCTTTTCTTCATTCTC TTTTTCACTAAAAATCACTTTTTTTAACTGAATTTTAATACAAAATGTCGGAATGATTGAAATATGTTATTATACGAAGTCTTACATTTCCGGGTATTAG ATATTATGACTTAACTTCCTTATTATTACTTGTACTGCACCAATTAGAAACACATCATCAACATTTGGGTTTACGAGTGTGCTAGAGCTTGTAATCCTTA TTCTCTTAATATATATTGCTAGTCTGTAAATGCTCCTCGGGAGGTAGACACGATTGGTAGAACCCAGTTAACAAATTCTTTTATTGTTTAGTTATTTATT CTACGCTCCTTTATTTGATTGCTTGTGGTCAACACAAAATAAGTTAAGTGAATCACTTCTATTTTCTAAGAGAGTGAACCCTGACACAAAGGTAAGGTTG TTGCAGTGATCAAGAGGTCACAAGTTCAAATCCCGGAAAAAGCCTCTCTCACTTGGCTGCGTACATCTGCTCAGAATCATGCGCTTGGCCGCCTTTTGAT TTCAACTTTTATTTTGCTTGTTTGTTTTTAGGTAGAGCTCTTCAGAAGAGAAATGTCTTGTTGGTTATTGCTCACCCGGATGATGAATCCATGTTCTTCA CGCCAACTATAAATTTTCTGACTTCAAGGGGGCATAGTGTTCAAATACTTTGCTTATCTGTTGGTGATGCAGATGGCAAAGGAAATATCAGAAAACAAGA GCTTTTTCAGGCTTGCGTAGCTCTCAAGGTGATCTATAAAATGGTTTTAAAACAGTTATGGTTGGAACATAGTTTCAGATCTTATCTTCAAATATTAGAC ATTGCCCCTCACCTGAAATTATTTTTTAGTTTTCTCTTTTGATCATTTAGTGGTCATTGCTTTCCTATCCTAGAACCGAATTTCTTGGGTAAACTAGAGA CCCTTTCATCCAGAATTTTCCTCGCATAAGTTGAAGATGACACACTGTATAAATTTAAAATGGCCGTCTTTTGTATGACATTGGACATTGTGAGCACAGG TTCCCATGCAGCAAGTGAAGATTTTCAACCATCCAGATCTGCAGGTTTTTATCCTATAGGTCTCTGGAAAATCTAAAATGTAGTATTGCTTTAAGTTTTA TCATTAGTTTTTCATATTACTGTTGTTTGATCTGTTTTCATACCTAGGATGGTTTTGGTAAAGCTTGGAACCATAGCTTATTGGCAAATATTATTGAGGA AGAAATAACCACTCACTCCATTAATATGGTTATTACTTTTGATAACTACGGTGTATCAGGTCATTGTAATCATCGTGATGTGCATTATGGAGTATGCAAG GTACTATATGATACTTTACAAAGAGATATTGAAGTTTGGGAGCTTGTTAGCAATAATATATTGCGCAAGTATAGCGGTCCTGTCGATATCTGGTTGTCTA TGCTTTGGCCTATACTGCTCTCAAATGAAACAATGCAGTGCTTCGTAAATGAAAATCCACGTAGGAGCTATCTCGCTATGGCCCAGCATGCAAGTCAATG GGTGTGGTTCCGCAAGCTTTTCGTGACCTTGTCCAGTTATACCTATGTGAACACTCTTAGGAAGATCAAGTAATGTTTCGACGCCGCCGGAAGAATTAGA TTGCTTGTAGCTTGTGATTATCTGAGATCAAGTAAGCATTCATACTCGTATTTGTTCTAACCCGGTTTGGTATCTACATGATTGTACATCAACTTTGTGC TTGGTTCAAGCTAAACAATGCATGGCACTGTGGCTCTAGAACCTCACTTCCTCTTGACATTCTTGAAAGAAATGGCTGCAATATTTCTTCATATTATCCT AGATGCATATGTTCATTAACATTGCTCAGAATTTGACTCAGTTTTTGCTTTTTTTTGTTGTACAATTGATTGTACTGGTTGAGTAGCACAATAAATGCTG TTTACTACTGATGTACTCTCACAAATGGCTATTACCATCCTTTGTGGTTTTATCTTGAGTCACACCCACAACCTAATGCTTGTAAATGTTCTGCAATTAT ATTTTGTGATCCTTCTTTCAAAA
• Tissue: pods
• Gene name: LI_gene_169252;
• Additional information: details;

Expression of Ll_transcript_354862

FPKM

• PAB: 0.6
• PNAB: 1.5
• PS1: 1
• PS2: 1.7
• PS3: 1.4
• PW1: 0
• PW2: 0
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_354862

• Blastp: Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase from Dictyostelium with 32.87% of identity
• Blastx: Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase from Dictyostelium with 31.95% of identity
• Eggnog: lmbE family(COG2120)
• Kegg: Link to kegg annotations (DDB_G0293136)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447785.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;