Id Trinity | TRINITY_DN49426_c1_g1_i1 |
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Name Transcript | Ll_transcript_353870 |
Sequence | TTGCTCTAGTTGATATGGAACGTGCTTTTGTGCCACCGCAACACTTCATTCGATTGGTACAAAGGAGGATGGAAAGGCAACGTCGAGAGGAGGAACTGAA GGGACGATCCTCAAAAAAAGGGCAAGATGCAGAGCAATCTCTACTTAACCGGGCCACTAGCCCTCTAACTGGTGGAAGCATGAAATCAACGAAGGAGGAC AAGAAGGAGAAGGAAAAGGACAAATCAGGGCAGGCAGAGAAAGAAGGTCAAGAAGGCCCTGCTTTAAAGACTGCGGGTCCTGAAGGGGAAATAACTGCAG GATTTTTGCTAAAGAAAAGTGCAAAAACTGATGGTTGGAGCAGACGATGGTTTGTGCTAAATGAGAAGACTGGGAAGGTTTGTAACTGCTAATTGAAGTC AATAAAATATTTTTGGTTGTGTTCTGTAGGCTTCTGTTATTATTCTTAAGTATGTAATTCTGGATTCGGTGTCTTATGGTCAGCAAACTAGTCTGTTGAA CTTGGCTACTTGGACCTTGGTAAAATTAGTAATTCATTTCATGCTCCTACTCAAAGTTATTCGTAGTTTATTTTTGAAAGTTTTCCAAGCTGATTGCCTT TGCTGTATCCTACGCTAAACAATTTTTGTAGATGCACAAATATACATGTCTGAGATGACTTTATAAGAATATATTTCACATATATGGACTTGGATTTTGT ACATGCACAAAATTGTTCGATTGGTGTTTTTCTTGTCTGCATGATGTCAAATGATATGATTTCACAATAGCTAGCAAACAACAAAAAAGCCCCAGTCCCA CTACATGGAGTCGTCTCTCTACATTCTTACAATAGCTAACACTTGTATTAGTTAGCAGGAACAGCTTCACCTTTAATTTTAAGGATCGAGCTTGCTTTTG TAAGGAGTGTTTTGTAGGTATTCTAAAGTCATGCTAGAAAAGAGCTTGTCCACCCAATGCAGGGTTTTGGTTCTCGATGTGTATACTAGGAAGAGGACAT GGAGAAATCATCATGTTATGGCCAAGATTAAGTGGTGGCAATAATAGCATAATAACTCTAATTTTGTAAAACCCCCTTCAAGATTGAGTTTTACTCAGTT TTAAGCCTTTAAGCTTGTTACAAACAGGTAGACCTAGCTTCATAACCTATAAATAATGTTGCAAGGCCTAGGACATTATGCATTGTTGGAAAGATGCACT GGTGCAGGGGTTATTACCTGTCAAGGAATTAAACAGAGCAAGGCTGGTAGCAGCTGCTGGAGTCGAGGTAAAAGCGGCTTGGGTTGGGATGACTGGAAAT GGACTGAAGACCCGGTTTGTGGTGGTTGCTGAAACGGTGGATGGATGGACTGGCTGTATCTTGTTTGAGGGAAACAGATTCTTGTTTGCAGTGACTATCT TTCTCATTGTACTCTCCATAGTAATCGTTAGAATCTGGACACAATGTGGATGTCTATTCCAAGAACAGTGAAGTAAATGAAAACGAGGAACCAACACTGG CATTTGTGGATAAACTGTCCAGCCATCAAACTTGCAAGCCTCAGTTGTGAAAAGCAGTCTAATATAAGCCTTGCATTCTGGTGAGCTAAGTATTTCTGGG AGCTAGCTCAGGGCTTGAGAAGTTGTCTTAAAATGCATGACACAGCCACTGAAAATGAATGCAGGGTGAGAATAGAGGATAAAAAGCGAAGGAGTTATGT AGTTTTGGAAAGAGAGCACTGGAGTTTTGGTAGAAGAGTTGAAAAAGACGATAGAGATACTATATTTTTGAAAAGGATTGAGATGCTATATTTTTGAAAA GGATAGATATAATATGAATAATAGAAAATAGAATTTATATGATGAAGTATAATGCAAAGAACTAATGTGAAAATATAAAAGTTAGAGAAAGGAAAAACTG TATTGAACACTTCATTAAATGAATGAAATGTTAATTACAATAGAGAAAGCTTATCCCTTTATAATGGGAAAGCTTGTAAAGGAATATACTATAGGAGGTG ACCTATACAACAATTCACCTCCCCTAACTAACTGAAACAGTAACTGTAACAAACAGTTACTTGAACAGAATTACTAACTGTCAGTGACTGTTGTCACAGC AGTTAGTAACCAAGCTAGGCTTGGGTCTTATTCTCTAACAACTAACTTCTATTTATACTAATAATTAGGATAAGTACTAAAGTAGTGCTAGTACAACCCC AGCCGAATAAGGCTAATAACAACTTAAATATTCTAACATGGTTTTGTTTTTTGAAAGGGATAGCATGAATTATTTTGCTTCAACATGCTTCATAAAAGCT TTCACTGATAGTTCCTGAAGTTTTCATCCAATTATTATACTCTGATGTTAGAGTTACATTTAGAAACTTTTAATAAAACTTGCCATGTGTATTGTTGACC TTAACTTTGCACTTCACAGCTTGGGTACACGAAAAAGCAAGAGGAAAGGCATTTCCGTGGTGTTATAACATTAGAGGAATGTAACATTGAAGAGGTTCCA GAAGAGGATCCTCCATCAAAAAGCTCAAAGGACAAGAAGTCCCAGGGACCTGATTCTGGCAATGTTAACCTAGTTTTCAAAATTACCAGTAGAGTTCCTT ATAAAACTGTTCTGAAAGCTCATAGCGCTGTTGTTTTGAAAGCTGAGAG BLAST |
Tissue | pods |
Gene name | LI_gene_169264; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_353870
Blastp | Dynamin-2B from Arabidopsis with 77.27% of identity |
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Blastx | Dynamin-2B from Arabidopsis with 77.27% of identity |
Eggnog | Dynamin family(COG0699) |
Kegg | Link to kegg annotations (AT1G59610) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413444.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |