Ll_transcript_353042

• Id Trinity: TRINITY_DN49436_c0_g1_i4
• Name Transcript: Ll_transcript_353042
• Sequence: CTCTCCTCTTTGGAAGTATTTTAAAAGGAGAAGTGAACACCTTTGTACAATACCACCTATGAAAAATAGTAAAATTATAACAGAAACAATTATTAGTTAT TACAACATGCGCCCACAGAGTAATACTACTACAACTACTAATATTAATACCTTTTCTGATCCTTCTTTTTCTTCTTCCATCCATCGTAGAATAACTACTC TTTCAAATCATCTCCTTAATCCTCACATGGCTTCCGATAATCAATCCATTTCCGTTTCTCCAACCGCTTCTTCTCATTCCGTTTTCGCTCATCTTCTTCC CGCTCCTGAAGATCCTATTCTCGGGGTCACTGTTGCTTATAACAAAGATCCAAGCCCTGTTAAGCTCAATTTAGGTGTTGGTGCTTACCGAACTGAGGAA GGAAAACCTCTTGTTCTGAATGTAGTGAGGCGTGTTGAACAGCAACTTGTGAATGAAGCGTCACGCAACAAGGAATATCTTCCAATTGTCGGAGTCGCCG ATTTCAACAAATTGAGTGCTAGGCTCATTTTTGGTGCTGACAGGTTATATTAACTTCTTTTAGCAGCTGGTTTTTCAATCTTTGATTTATTGCTTGTAAT TTGTAAATATTTATTCACATTCAGTACCTGATTGTTTATATGCTTACATTTTTTTGTATATAGCCCTGCTATTCAAGAGAACAGGGTGACCACTGTTCAA TGCTTGTCTGGTACTGGTTCATTAAGAGTTGGGGGTGAATTTCTAGCTAGACACTATCATGAAGTAAAATCTGTTGTCCTTGACTTTCTTTTCTCCCCTC TTTGCCCCTTTGAACTGATTTTTTGTAGTCTTAGCTTACCATTTACGTTCGCGCTTTTTCTTCGCAGAGGACTATATATATTCCCCAACCAACATGGGGC AATCACCCAAAGATTTTCACCTTGGCTGGGTTATCTGTCAAATCCTATCGCTATTATGCTCCGGCAACAAGAGGGCTTGACTTTGAAGGACTCCTAGAAG ATCTTGGTTCTGCCCCATCTGGATCCATTGTTTTGCTACATGCATGCGCACATAACCCTACTGGTGTTGATCCAACCCCTGAGCAATGGGAGACGATTAG GCAGCTGTTGAGATCAAAAGCTTTGTTACCTTTCTTTGACAGTGCTTATCAGGGGTTTGCTAGTGGAAGTCTAGATATAGATGCACAGGCTGTTCGCTTG TTTGTTGCTGATGGGGGTGAATTGCTGCTTGCCCAGAGTTATGCTAAGAACATGGGTCTATATGGAGAACGTGTTGGCGCCCTAAGCATTGTCTCCAAGT CAGCTGATGTTGCAAGCAGGGTTGAGAGCCAGGTGAAACTTGTGGTTAGGCCAATGTACTCAAACCCTCCCATTCATGGTGCATCCATTGTGGCAGCTAT TCTCAGGGACAGCGATTTGTACAATGAGTGGACTATTGAGTTGAAGGCAATGGCTGATCGCATTATCACAATGCGCCAACAACTTTTTGATGCTTTGCAA TCCAGAGGCACACCCGGTGATTGGAGTCACATTATCAAGCAGATTGGAATGTTTACTTTCACAGGACTGAATGCTGAGCAAGTTTCCTTCTTGACTAAGG AGTACCATATATACTTGACATCTGATGGGAGGATTAGCATGGCTGGTCTGAGTTCCAGAACAGTTCCTCATTTGGCTGATGCAATACATGCAGCTGTAAC CACTGTCTAAAACATGTTACTGATTACTGTTTTCTATTTGCCCCTTGTTGGAGGACATCCATTATTTTCGTACAATAATTATCAACATCATCAATCAAAC CCTAGCCTTTTATTTTGATGTGAGAATTTAAGGACATCATAGCATTTTATATCTGATCATTATGACATTTTTGTTCAGTTATCTTAATATGGCACCATAA ATGTGCCAACATTTTTATTTTACTCTTTGATGTTGGGGATATAAACTAAATAAAGCAGACTTTTAGTCCGATATCTACCAGTATCTTAATAATCTTAAAA TTTTGAAGATTAATTCTTAGCAAAATAGGAATTTGTAAAAAAGTTGTGACGAAACTGAGTGTAGAAATATAAAGACTAATAATCCGAATAGGTAACAATC AAAATTTGGATTGGTTGGAATTGTAGGGAATGCTTAGTTTAGCCGGATTATTATTGAAATGTATATATTTGCTGAAAAA
• Tissue: pods
• Gene name: LI_gene_169342;
• Additional information: details;

Expression of Ll_transcript_353042

FPKM

• PAB: 0.4
• PNAB: 0.2
• PS1: 0.5
• PS2: 0.9
• PS3: 1.2
• PW1: 0.1
• PW2: 0.1
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_353042

• Blastp: Aspartate aminotransferase, cytoplasmic from Daucus sect. Daucus with 86.67% of identity
• Blastx: Aspartate aminotransferase 1 from Medicago with 88.26% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438405.1)
• Pfam: Aminotransferase class I and II (PF00155.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;