Ll_transcript_354005

• Id Trinity: TRINITY_DN49439_c2_g1_i5
• Name Transcript: Ll_transcript_354005
• Sequence: ATTCTAGGACATAGCTGTTTTACAAATACATATATTAATTAGAAACCAGGTTAGATAAGAGACACATCATCTTTAGTTACTACCGACCACAGTCTGTGGT TGTTGGTGATTTTATCCGTTACTTAGTGACGAAGTGAATGAAGCATTACAAGCTTGAACTGACACAAAGTGAAACCCATTTGTGAGAAGAATTGTGAGAT TTGTTCTTCAAATGATGAATTGTGAGCAATTGGGGTTCCTGGCTCTTCCTCCTTATTTATCATCACATTGCAGTAACAATAAGTGTGGATATTCATATAT TTGGCGCATGAATAAGTATACTTCTCCTCTTTTATTTGCTTCTTCTTCTTCAGCTCCATCAGTTAGTGGTTCGGGTGATGAGTATTCTGAGCCGTTGGTG GGTGTGGTTACAAAGAAGAAAAAGAGAATTATAGCTGGCATAGATCAGGACGAGTTAGTGGATCCGAAGCTTTTAGCTGATCTAGACAGTAGCTTTTGTG AGTTCAAAGGAGTACATATACACCACAAGATATATGATGCTGTATCCCAACCACAAAGCACGTTACAGAATCAAACTGTTTCTGATCAAATCAAGAAGCT AGGTTTTCCCATGATTCTGTTACATGGATTTGGAGCCTCAGTTTTCTCTTGGAAACAAGTTATGAAGCCTTTGGCAGAGGTCACTGGTTCTAAAGTTCTT GCATTTGATAGGCCAGCCTTTGGATTGACATCAAGGGTAAATTTATCTAGCCATCGTTTTTCAGGAGCAGGAGACGCAAGACCTCTAAATCCGTATTCAA TGGCATTTTCAGTGCTTGCTACCTTGTATTTCATGGGTTTATTAAATGCCGAGAAAGCAATTTTAGTGGGGCACTCAGCTGGTTCACTTGTAGCAGTTGA TACATATTTTGAAGCTCCTGAACGTGTTGCTGCTCTGATCCTTGTTGCCCCAGCAATTTTTGCTCCACTGACTACACCAAAAATTGTTAAAGAAAATCAA TCAGGACAGGATAACCAAACAGAAGAAGATAATAGTTCTAGCAGAAACAATCCAATTTTTGGGCTTTACAAGTTATTGTCCAAGATTAGCAAGCAGATTG CAGAGGCAATAACACAGATGACGAAGGGGATGATAGTTATGCTCAACTCTTTGTATCGGAAATTTCTATCAGCTATCCTGCGTTCTTCCCTAGCTATAAT GCTGGTAAGAATGGCAATTGATAAGTTTGGTACCGCTGCTGTTCGAAATGCATGGTATGACCCAAAACTGGTTTCTGAGCATGTGCTTAGTGGTTACACA AGGCCATTGAGGACCAGCGACTGGGATAAGGCACTGCTGGAATACACTGCAGCACTGCTTCTGGACGAGGAATCTAAAACAAAGCCATCGCTTTCTCAAA GACTTCATGAAATATCATGTCCTGTTTTGATTGTCACTGGTGATACTGACAGAATAGTCCCTTCATGGAATGCTGAGAGACTTTCACGAGCCATACCAGG CGCATCGTTTCACGTAATTAAGCAATGTGGCCATTTGCCCCATGAAGAAAAAGTAGATGAATTTATTTCAATTGTTGAAAACTTCCTAGGGAGACTAGTT GGAGATTCAACTGAGCAGCATCTACAATCTGTAATGTGAAATGTCAACAACTCAAGCATCCCATTTTACATCATAGAAGATCCATATAATACATAGCAGA TACTAATGCAGTTTACCAGGTGGAGAAAGATGCAGTGAAGCTGTAACGAGTCATGATCTAACTTAATTCATTATGCACAATGATCTTTGTCTATCAGCTA ATGAAAAGCTTGGAAGTGGGAAAAAAGCTGATAAGCAATGATCCAAATTATTTTGGGGTGTAACAATGACCTATAATTGCATTATATTGCTGCTAGCCTG TGAAATAGTACTTGAAGAACTTCTGTAACTCAAGTATACCCCTGGCTATTGGGCCTATAGCATGGATGTATACATAAGTGTAACAAGACTTATTTTTTCT AAAACGTTATCTATTTGATTTTGATATTAAGTTATAATTTTTTTCTTCCTTTTGTGCCAAAAACATAAGCACCAAGTCATTAAAGCTAGCAGCTTCTCAT TGGAAAAAAAAACATTGCAATATACAAAGAAAAGTAATAAAATAACTTGATCTTTCAAAGCTGTGAATGACACTTGGCATTTTCTTTAACAGAAATCCAA GAATATTGAAGCCTTTGGCATTGGCCATATCTAGTTTCCTGGTATGTTGGGTACTGCCAAATATAGTTATTGAAGGTTCTCAACTCATTGTTCAGAAAGG TGGATCATCTTCTTCAGTAAGATTAGCATCACCTAATCCCGGAGGAACATCAAATCCTGATATGAAATCGTCACCAAATATTACAGCACCAGCTGCTAAT ACCCCAGCGCCTAGCCCTACAGCGAACCCTGGAGGTCCCCTCCGTCCGGTGCCTTCCCTCGATGGCGCCATCTCTGTGATGCCTGCTGATAAGTCATCAT TTCTTGGGAGAAAAATAGGAATGTAACCAATATTTGAGGGTGGAGGAGTTGTTCTAGTTCTAGGTGGCTGATAGCTTGGTCCAACTGCTGCATGGTAACT TGGTTCACCCACATATGGGTCAGAATGGTCAGGGATGTTTGTTTGTAGATGATTTTCTGGTTGATTTATTGATGCTTGAAGCTGCTGCTGTGAGTAGCCT TGCTCTAATGCACCCTTTGTGGTCAATTGGGTATCCTCGCACTGGAGGCAATCCTATCAGAGCCGGGAACATCCACAAGTATGTGGGGCTAACTCTCTCA GCGGTCATTTTTTCCATCCACAAGACTCAAACCAGGGACATTGTTTAAGGGGAATAAACATATACCACTTGAACCAACACCGGTCAGTAAAGACAAGAGG TAACTTTAATAAAAAAAACTTGTCAGCTTCCACTTAAATTATGTTACCAATTATCAGGAATTAGAGATGATATTTTGCACATAAAAAAAGCAAACACATT TAAACACAGACTTTCTATCTTTATTTTTCCAAACAAGTGAATTGTAAAAATGACCTGAACTTAATGTATAAATATTATGACTCTAGATAACATTTCATAC ACAGATAGAATAGATGGATGAAGATATTATGTTTTTGTTCTCTTTCATCACAATTTTTAGTGAAACCAAAATGTTCTACTTTTTTTTATCTCATGTCCTA TTGTTTTGTTTCATCCTATTATGAGATGTTATACAAATGCTACCTATGAGTAAAGGAGAGAAACAAAAGATGCTAAATGCAGAAGAACAGGTACAGCAAA GCTGAAAGATTTCTTTTTTCGTAGTTGGCAGCTCTGAACTTCCTTATGCCTTGCCTTTGAGACCTCAGAATTCTTAACTTGCTTGACAAGAAACTCTTTG AGAACAACAGTTGCTGAGCCCTGAAGCTTTTCTGTTAGGAATATCGGTTCTAAACTGTAAACTTCCACATTCAGTGTCAAATTTTGGAAGTTTGGCGCCG AGTCATCGACGGGAATGGCAAATTTGGTTCCCCAAGCAGGATTTGGATTCCCAGAATCATCAACTTTGGTGCAGTATTTGCTGTTATGATCAATCCACCC TACAGCAAACCATTGACGTTTCCAAAGCG
• Tissue: pods
• Gene name: LI_gene_169364;
• Additional information: details;

Expression of Ll_transcript_354005

FPKM

• PAB: 2.8
• PNAB: 6.7
• PS1: 5.9
• PS2: 3.6
• PS3: 5.1
• PW1: 10.2
• PW2: 8.3
• PW3: 7.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_354005

• Blastp: 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase from Klebsiella with 25% of identity
• Blastx: 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase from Klebsiella with 24.77% of identity
• Eggnog: Alpha beta hydrolase(COG0596)
• Kegg: Link to kegg annotations (KPN_02120)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417082.1)
• Pfam: alpha/beta hydrolase fold (PF00561.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;