| Id Trinity | TRINITY_DN49439_c2_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_354007 |
| Sequence | ATTCTAGGACATAGCTGTTTTACAAATACATATATTAATTAGAAACCAGGTTAGATAAGAGACACATCATCTTTAGTTACTACCGACCACAGTCTGTGGT TGTTGGTGATTTTATCCGTTACTTAGTGACGAAGTGAATGAAGCATTACAAGCTTGAACTGACACAAAGTGAAACCCATTTGTGAGAAGAATTGTGAGAT TTGTTCTTCAAATGATGAATTGTGAGCAATTGGGGTTCCTGGCTCTTCCTCCTTATTTATCATCACATTGCAGTAACAATAAGTGTGGATATTCATATAT TTGGCGCATGAATAAGTATACTTCTCCTCTTTTATTTGCTTCTTCTTCTTCAGCTCCATCAGTTAGTGGTTCGGGTGATGAGTATTCTGAGCCGTTGGTG GGTGTGGTTACAAAGAAGAAAAAGAGAATTATAGCTGGCATAGATCAGGACGAGTTAGTGGATCCGAAGCTTTTAGCTGATCTAGACAGTAGCTTTTGTG AGTTCAAAGGAGTACATATACACCACAAGATATATGATGCTGTATCCCAACCACAAAGCACGTTACAGAATCAAACTGTTTCTGATCAAATCAAGAAGCT AGGTTTTCCCATGATTCTGTTACATGGATTTGGAGCCTCAGTTTTCTCTTGGAAACAAGTTATGAAGCCTTTGGCAGAGGTCACTGGTTCTAAAGTTCTT GCATTTGATAGGCCAGCCTTTGGATTGACATCAAGGGTAAATTTATCTAGCCATCGTTTTTCAGGAGCAGGAGACGCAAGACCTCTAAATCCGTATTCAA TGGCATTTTCAGTGCTTGCTACCTTGTATTTCATGGGTTTATTAAATGCCGAGAAAGCAATTTTAGTGGGGTATGTGAATACTGAATGTTCTATCATCTC TTTTGTTAAATGTTTTTTTCCTGAGAAATCAGGTTATTTTCATCCATCTAAGTAGTGCATGCTTCCCACGGCAGTTATAAGATGCTAGCTAAATAAGCAC TTATATATTGCATCCAAGCATCTGGGTCAGTGTTATTTATATGATTATCCAAGTTGTTACACTTATGGTTGCATTAATATGATTGTCTCCATTCATAAGT AGTAGCCATGGAATCATGTATGTCCCTTGTAGGTAAAAAAGATTTACATATTTCTAGTGGTCTTTTACTTCCATTTCTTCATTTTAACCTCTTACTACAT TGAAGTCAGATCTTAGTTTATTATGTATAAATTGATACTGAACTACTACATTTAACAACAGAAAGAACGTGTTTATGACCCACTGTTTCCCCCCTTTTAA AAGCTGAGATTATGAAAATGACAATTCAGGCACTCAGCTGGTTCACTTGTAGCAGTTGATACATATTTTGAAGCTCCTGAACGTGTTGCTGCTCTGATCC TTGTTGCCCCAGCAATTTTTGCTCCACTGACTACACCAAAAATTGTTAAAGAAAATCAATCAGGACAGGATAACCAAACAGAAGAAGATAATAGTTCTAG CAGAAACAATCCAATTTTTGGGCTTTACAAGTTATTGTCCAAGATTAGCAAGCAGATTGCAGAGGCAATAACACAGATGACGAAGGGGATGATAGTTATG CTCAACTCTTTGTATCGGAAATTTCTATCAGCTATCCTGCGTTCTTCCCTAGCTATAATGCTGGTAAGAATGGCAATTGATAAGTTTGGTACCGCTGCTG TTCGAAATGCATGGTATGACCCAAAACTGGTTTCTGAGCATGTGCTTAGTGGTTACACAAGGCCATTGAGGACCAGCGACTGGGATAAGGCACTGCTGGA ATACACTGCAGCACTGCTTCTGGACGAGGAATCTAAAACAAAGCCATCGCTTTCTCAAAGACTTCATGAAATATCATGTCCTGTTTTGATTGTCACTGGT GATACTGACAGAATAGTCCCTTCATGGAATGCTGAGAGACTTTCACGAGCCATACCAGGCGCATCGTTTCACGTAATTAAGCAATGTGGCCATTTGCCCC ATGAAGAAAAAGTAGATGAATTTATTTCAATTGTTGAAAACTTCCTAGGGAGACTAGTTGGAGATTCAACTGAGCAGCATCTACAATCTGTAATGTGAAA TGTCAACAACTCAAGCATCCCATTTTACATCATAGAAGATCCATATAATACATAGCAGATACTAATGCAGTTTACCAGGTGGAGAAAGATGCAGTGAAGC TGTAACGAGTCATGATCTAACTTAATTCATTATGCACAATGATCTTTGTCTATCAGCTAATGAAAAGCTTGGAAGTGGGAAAAAAGCTGATAAGCAATGA TCCAAATTATTTTGGGGTGTAACAATGACCTATAATTGCATTATATTGCTGCTAGCCTGTGAAATAGTACTTGAAGAACTTCTGTAACTCAAGTATACCC CTGGCTATTGGGCCTATAGCATGGATGTATACATAAGTGTAACAAGACTTATTTTTTCTAAAACGTTATCTATTTGATTTTGATATTAAGTTATAATTTT TTTCTTCCTTTTGTGCCAAAAACATAAGCACCAAGTCATTAAAGCTAGCAGCTTCTCATTGGAAAAAAAAACATTGCAATATACAAAGAAAAGTAATAAA ATAACTTGATCTTTCAAAGCTGTGAATGACACTTGGCATTTTCTTTAACAGAAATCCAAGAATATTGAAGCCTTTGGCATTGGCCATATCTAGTTTCCTG GTATGTTGGGTACTGCCAAATATAGTTATTGAAGGTTCTCAACTCATTGTTCAGAAAGGTGGATCATCTTCTTCAGTAAGATTAGCATCACCTAATCCCG GAGGAACATCAAATCCTGATATGAAATCGTCACCAAATATTACAGCACCAGCTGCTAATACCCCAGCGCCTAGCCCTACAGCGAACCCTGGAGGTCCCCT CCGTCCGGTGCCTTCCCTCGATGGCGCCATCTCTGTGATGCCTGCTGATAAGTCATCATTTCTTGGGAGAAAAATAGGAATGTAACCAATATTTGAGGGT GGAGGAGTTGTTCTAGTTCTAGGTGGCTGATAGCTTGGTCCAACTGCTGCATGGTAACTTGGTTCACCCACATATGGGTCAGAATGGTCAGGGATGTTTG TTTGTAGATGATTTTCTGGTTGATTTATTGATGCTTGAAGCTGCTGCTGTGAGTAGCCTTGCTCTAATGCACCCTTTGTGGTCAATTGGGTATCCTCGCA CTGGAGGCAATCCTATCAGAGCCGGGAACATCCACAAGTATGTGGGGCTAACTCTCTCAGCGGTCATTTTTTCCATCCACAAGACTCAAACCAGGGACAT TGTTTAAGGGGAATAAACATATACCACTTGAACCAACACCGGTCAGTAAAGACAAGAGGTAACTTTAATAAAAAAAACTTGTCAGCTTCCACTTAAATTA TGTTACCAATTATCAGGAATTAGAGATGATATTTTGCACATAAAAAAAGCAAACACATTTAAACACAGACTTTCTATCTTTATTTTTCCAAACAAGTGAA TTGTAAAAATGACCTGAACTTAATGTATAAATATTATGACTCTAGATAACATTTCATACACAGATAGAATAGATGGATGAAGATATTATGTTTTTGTTCT CTTTCATCACAATTTTTAGTGAAACCAAAATGTTCTACTTTTTTTTATCTCATGTCCTATTGTTTTGTTTCATCCTATTATGAGATGTTATACAAATGCT ACCTATGAGTAAAGGAGAGAAACAAAAGATGCTAAATGCAGAAGAACAGGTACAGCAAAGCTGAAAGATTTCTTTTTTCGTAGTTGGCAGCTCTGAACTT CCTTATGCCTTGCCTTTGAGACCTCAGAATTCTTAACTTGCTTGACAAGAAACTCTTTGAGAACAACAGTTGCTGAGCCCTGAAGCTTTTCTGTTAGGAA TATCGGTTCTAAACTGTAAACTTCCACATTCAGTGTCAAATTTTGGAAGTTTGGCGCCGAGTCATCGACGGGAATGGCAAATTTGGTTCCCCAAGCAGGA TTTGGATTCCCAGAATCATCAACTTTGGTGCAGTATTTGCTGTTATGATCAATCCACCCTACAGCAAACCATTGACGTTTCCAAAGCGACGCTGGAGGCT CGATTCCATGAGCAGATATCAAACACACTTCCACCCAGATAATCCCCATAGGAATTAGACAGATAAACAGAAATGAGATGTTTTCTCCTTAAGCTTCTGA ATGTTGCACCAGGAATAGAGACAAGGCAAACTTGTTCTGTGGTATTTGAAAGGCTACTTTACTTTATTAGTGAGAAAACTCTTATACCTTTTCCAGCTAA GTGCATATGGAGGTAGAAAGGAATCTCTTAAATATGCTTACATTGTGGGATTAATTGAAACCTCCTCATGCAAGGGTGGAAGCTTCATAAAGTAAAAAAA AATGATATTTTCACTCTAACCCATATTACGAAGTACATCTAAAAGGGTAGGGTGAGAATAAAAAGGGTGTGTAAGTGTGTCGGTTATTCCAAGTATGAAG AAGAAGTCTTTGAATGAGTTAAATAGTATATAAGTGAATGAACTTATAGCCTTAATGCTTAAGATTTTTGGTTAATATATGGTGTCAAGTTTACTTATAT GTTTCTTTCACTTAGTCCATAGAGGAATGTTATGACCTATAAATGAAGATCACCCAACATTTATTTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_169364; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_354007
| Blastp | - |
|---|---|
| Blastx | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase from Klebsiella with 42.31% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417082.1) |
| Pfam | - |
| Rfam | - |
| GO | - |