Ll_transcript_354678

Id TrinityTRINITY_DN49443_c2_g4_i1
Name TranscriptLl_transcript_354678
SequenceATTATCTCGAAAATTTTAGCCGGGAGACTGAAGTTAGTGCTGCATTCGGTGATCTCGGAGAACCAAACTGCGTTCCTTAAAGGAAGGTATATTATGGATG GTGTGGTTATCGGCAATGAGATTATTGATCAGGCTAGAAAGAAAAAGGATGGAGATTGCTTCATCTTTAAAGTGGATTTCGAAAAGGCTTTTGATTCCGT TAATTGGAGCTTCATTCTCTATATGTTGGAAAGGATGGAGTTCTGTTTAAAATGGCGAAATTGGATTAAGAACTGTCTGCATTCTAACTCTGTTTCTATT TTAGTAAATGGGAGTCCTGCCAAGGAATTCTCTATGGCTAGAGGTTTGAGACAAGGAGATCCAATCGCGCCTTTCCTTTTCCTTATAGCTGCTGAGGGTC TTGCTGGGATTATGAGATCTGCGGTTTCAAAGAAGATTTTCAGAGGCTATCTAGTTGGTCAAAATGAGATTGAAATCTCGCATCTTCTGTATGTTGATGA CACTTTGCTGATTGGTCAGGATTCTGTGGCTAATATTTATATTCTCAAAAGCATTCTAAAATGTTTTGAGTTAACCTCTGGATTGCGTATTAACTTTCAC AAGAGCAGTTTTATTGGTATTAACTCTGGAGTTGGTTTCGTTCAGATGGCGGTTGACAAATTAATATGCAAAGTCGGCTCGGTCCCCTTCAAGTTCTTAG GAATTCCGGTCGGGGCCAACCCTAGGAGGATTTCTACTTGGTCTACCGTCGTTAATTCTTTTAAAAAGAGGCTATCTTCTTGGCAGCATAAACTCATCTC CTTCGGTGGTCGTGTCACTCTCATTAAGTCTGTTCTTAACTCTCTTTTTGTTTTCTTGTTTTCTTTCTTTAAAGCTCCGGTTTCTGTTATTCATGAGCTG GAAAAAATCCAAAGAAGGTTCCTTTGGGGTCGGGGGGAGGAGAGAAAATGTATTCATTGTGTTAGTTGGAACACGGTGTGTAGGTCTAGAGGGGATGTGG GTCTCGGGATTAAAAATTTAAGTTTGTTTAATCTTTCCCTTTTAGGTAAATGGAGGTGACGTCTTTTGCTTGAGAGAAATGCTCTGTGGGTGATGGTTTT GCGT BLAST
Tissuepods
Gene nameLI_gene_169408; 
Additional informationdetails; 

Expression of Ll_transcript_354678

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_354678
BlastpLINE-1 retrotransposable element ORF2 protein from Homo with 25.08% of identity
BlastxLINE-1 reverse transcriptase homolog from Nycticebus with 25.94% of identity
EggnogNA(ENOG410Y9TZ)
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019418409.1)
PfamReverse transcriptase (RNA-dependent DNA polymerase) (PF00078.26)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;