| Id Trinity | TRINITY_DN49443_c3_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_354685 |
| Sequence | TTCAATTCTTTATGGATATGACATGTAACCTGCACCACACACAAACTAACTTCCCACATATCCACAAATTGTTCCACCTCAACAATGAAACTAGATTCAC AAATATCAACATGGACCAATCATAAGTAACACTCTCCCATCATCACCCAAAGGAAATCCAATTATAGATTAGCTTATACCCACACCACTCTCCTCTATAT TATTCTTTGTATCATTTCCCAATACAAAGCAAAGCACCATTCATTCCCCTTTTAGAATCCTTCAAAACAGCCATATTCCAAATAATTGTGAATATGGCTA CTAACACATTAATGAGTTCTGCTATCTCAGCTTTCCCATCTCTTCTTTCTTCCTCAAAATCAAGATTTACCACTTCATTTCCACTTTCATGCATTGGTGC CAATGCCTCAAGTCGTTTTTCCATGTCTGCTGAGTGGATGCCTGGTGAGCCTAGACCACCTTATCTCGATGGTTCAGCTCCTGGTGACTTTGGATTCGAC CCTCTTCGTCTTGGTGAAGTACCAGAGAATCTTGAGAGATTCAAAGAGTCAGAACTCATTCACTGCAGATGGGCTATGCTTGCTGTTGTTAGTGTCATTT CAAATAATCAGTTTTAAGTTTGCATCCGCGACCTTTGTTCCTGGACCATATAATAATTTCGACTTATTTTGATAGTGTCGTTTTCTGGCATGGGGAAAAA GCTTTAGTATGCTGATGTTTGTTAAATTTTGCAGCCAGGAATTTTGGTGCCAGAGGCGTTGGGTTTAGGCAACTGGGTCCAAGCTCAAGAATGGGCTGCA GTTCCTGGAGGCCAAGCAACTTACCTAGGCAACCCTGTTCCATGGGGCACCCTCCCTACAATTCTTGCCATTGAGTTCCTTTCTATTGCCTTTGTTGAAC ACCAAAGGAGCATTGAGAAAGACCCTGAGAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCTAAGGACCCTAAAAAGTTTGCAGAAAA CAAGGTCAAAGAAGTTAAGAATGGACGTCTTGCTCTATTGGCTTTTGTGGGATTCATTGTTCAACAATCAGCTTACCCCGGAACTGGACCTTTGGAGAAC TTAGCTACTCACTTGGCTGATCCATGGCACAACAACATTGGAAATATCCTTATTCCCAAATAGATTATACTTTGAAAAATCCAATCTTTGTTATAAAAGC TACCTCTTAAATTCCACGTAACATTTTGTAATGAATCAGACCTCTGTAATATGTACTGGCCAAGTCACATATAAGAATTATTGTGGTTGTGCATGTTCAT TGTGGTTTGTGTAATGTGGGTTATGGTAATTACAGTGAATTTTTTCGTTTGATTGTATGCGTGGGTTTCTAGTTATTGATTGTCCCTCCTAATAAGTATC ATTTTCAGGAATCGAATCCTTGACCTTTTGGTTATCCTAGGTGTAAGTATCAGAGTGCAACTAAGAGGGGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_169409; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_354685
| Blastp | Chlorophyll a-b binding protein 6A, chloroplastic from Lycopersicon with 69.9% of identity |
|---|---|
| Blastx | Chlorophyll a-b binding protein 6A, chloroplastic from Lycopersicon with 65.71% of identity |
| Eggnog | Chlorophyll A-B binding protein(ENOG410XVD6) |
| Kegg | Link to kegg annotations (544310) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460940.1) |
| Pfam | Chlorophyll A-B binding protein (PF00504.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |