Id Trinity | TRINITY_DN49444_c5_g1_i7 |
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Name Transcript | Ll_transcript_353073 |
Sequence | TGGGCCTCATATTTGAATTCCAAGTTCAATTTAGGATCTGGACCTCTTAATCTTATCATGATCTAGTTTCCTATAAAATTAGGTTTTATTAAACTAAAAG TGTTGTGCAGGACTCATAAATAGATTGAAACTCCAAAGGTTGTGCTTTATTCTTATGATTCAAAATGAGCTAGCCATAATCAAAATGAATCTCTAACTTT TTAGTCCTCCTAAAGTTAATTATGAAATGTAAGTTTTTTTCACTTTTTCCATGTTTCGGGATGGGATGAAGCACATAAGCTTGATTTGGATGGTTATTTA GCTACTTTACTATGGAAATATAATTAAGAACCGAGTCTATTGTGCAAAGTTTTGAATTTTCGAAATCGCTCTAGTAGTATGAGTAATTGAATATCCGGGT TTATAACAGAAAGATCTGCCACTCTCTTGCTCGTTGTAAGAGGGTTCAATTCGTTAGTACATTAACCATGTCGTTTGTGTGCTTGCATTTTTATGTGTTC ATGCTTCTCCCTTTATTTTTATTAGCCTTACTTCTGTTATATTATACGCGTTCCAGGCTAGAAGAGCTTTGAGGGCCTTGAGGGCAGTGGTAAGGCTGCA AGCTATATTTCGAGGCCGACTAGTGAGGAAGCAAGCAGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTTCGAGTTCAGGCACATGTCAGGGCAAATAAT GTGAGGAAATCTCCAGAAGAGAAAGCGGCGCAGAAATTATTGGATGAGCATCACAACCAAGCTGATTCTGTTACAGAAGCTGAGCAAAGATGGTGTGAAA TTCCTGGAACTGTGGATGATGTTAAAGCAAAGCTAAGAATGAGGCAGGAAGGAGCCATCAAGAGGGATAGAGCTATGACATACTCTCTTTCCACACAGCA ATCAAGAATGTGTGCTAGTCCAAACTCGAGATCCTCAAAGGCAGTGACTCCTCTCAAGCATCACAGCCTAGACAATAAGAGCTTAGGGTGTACCTTGTTA GAACGCTGGATGGCAACCAAGCCATGGGAGAGTCCAATGTCGAGGAGAAACGAAGATCTTGTTCCTACTTTTCAATCGAGAATGAATGGCGTGACAAAGA GGATTTCAGTTAAATCTCATACTCAATCGACTCCATCATCTTCGGCTATAAGCTCTGAGTGCATGTATGATGATAGCCCTGTATCAACCTCATGCACATC TGGATCACCACCATCTCTACGATCTACCAATATGGTGGAAGCAACAGAAGAAAAACATGTGCATAAGCTAAGCTACATGAATTTGACAGAATCAACTAAG GCCAAACTGAAGGGTTGTAGGTCTTCTTCGCAGAATTCGAAGAGGATCGCAAAGGAGGATTGTATGTCTAATAGCTCAAAAACAACATCAACATTTCTGA ATGTCGATGCTAGAAGCAGTTCAGGCTCAGATCCTTCAGTTAATTTGTGGAAGGATCTTTCTGCAACGCCTCTAAGGACAAGTTACCAAAAACGATACGC CAGGAGAGAGTTTCCATAACAAAAGGAGGCTTCGCCTAATGCGTCTACTTTTAACGGGTTAGTCCAACAGCTTGTTGCCTATTGTCACCTTGACAAAGTG AAGTGAAACATGCATTAAAGTCCAAAAATAGCTGATTGAGGGTGTAGATAATATAGGTGGTTTTGTGTGAAGAATGAAATGCCACAATAGTACACTACTT TCATTTGTTTGGTGCTTTTCTTTTACTAATTTTGACATGATATCTACAGTCTAAAAACTCAAATAGGACATACTTGACATTCTTTGGAAGATGGATATCA TGGATGCATTGCTGTTTTTTGTGTGAAGAATGACATGAAAGTTTGAATTAAATTGGCATGAAGTTGTGTTGCTCTTAGCAACTTGTGTTAACCATTAACT TTGAAGTTTTTGTATTGTTCAGTATCAGAAAATTATGCTCATAGTTACTCAAATACTGAAGATTGGGGGCTATGTGTTGTAATCACTTTAAGATTGGACT ATATATTGATTTTAAGAATTTACCTCCACTAAGAGACTAATATTAGTCAGCAACATAATTTATCCTTATATCTTTCCATAAAATAAATTATGTTCTCTTG TTGACTCCTACGAAGCACCGATACTTCAATAACCTTCATGTATCTGATATTAAT BLAST |
Tissue | pods |
Gene name | LI_gene_169417; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_353073
Blastp | Protein IQ-DOMAIN 1 from Arabidopsis with 32.28% of identity |
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Blastx | Protein IQ-DOMAIN 1 from Arabidopsis with 34.03% of identity |
Eggnog | NA(ENOG411040N) |
Kegg | Link to kegg annotations (AT3G09710) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448228.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |