| Id Trinity | TRINITY_DN49448_c0_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_355365 |
| Sequence | CATGTCTTGTTCCACTTGTCTTGTTTTGTTCCCTCCTAACTACTTTTTTCTTCTAATAAAAAATTTACTTAAACAAAATTACTATATTCCCATTTTCCAG CAAAGCAAATAGTGAGCTTTAATTTACCTTTCTCTTTTTCCAAAATCCACTCTATAAATCAACTAATCTTGCCCTTATTCCACAGCATAGTAGAAAAAGA AAGGAAAGGGTAAGAGAAGAAAGAAAGAAAGAAAGAAAGAATGGAGAACAAGGAAGAAGATGTGAAAGTTGGAGCAAGTAAATTCACAGAGAGACAAGCA TTGGGAACAGCAGCTCAGGGTGACAAGGACTACAAGGAAGCACCACCAGCACCATTGTTTGAACCAGGGGAACTCAAATCTTGGTCTTTCTATAGAGCTG GGATTGCTGAGTTTGTAGCCACTTTCTTGTTCCTTTACATAACTGTTTTAACTGTCATGGGTGTCAATAGATCACCCTCTAAGTGTTCCTCTGTTGGCAT TCAAGGCATTGCTTGGGCTTTTGGTGGTATGATATTTGCCCTTGTTTACTGCACTGCTGGAATATCAGGTACCCCTTTCACTCTTTTCTTTCATCTTTCT TTTTTATATGCTTTTATATTCTTTATAGTTTCAATAAGCTTATTAGGCTTTATTTAACATTGTATGTTATTTTATCTTTCAATATTAGTAAGTTGAGCTT ATAAAAATAAGTGCTTTTAGATTATCACACAGAATAAATCATCACTGATTGATAGTGTCATCGGTTGGTTCCTTTCAAGTTTCAATTTTTAGATGCTTTT TAAACTCATAACACTGTGAGTCTTCTCTTTATTTCAACAAGTTACCAGCTTTCAAAAAAATGGAAGTAATTTGGTCATTAATTAAGTAATTGAAGATTTA CCTTTTTTTTATAGTTTATTTCAAGATCTAACCATCACTTTATATTTCTCCAAGAGTTGAAGTCTTGAAAGGTTTGTGAATTATTTGGATATAAAAAAAA AGAATGAATCGAGGATTTAGTCTTTATTTCAAATTAAAGTATTTTTCCTTTGAACTAACGAATTCAGAGGTTGGTGTTTGTTGGTATAGGTGGACACATA AACCCTGCAGTGACCTTTGGTCTATTTTTGGCAAGGAAGCTTTCCCTGACAAGAGCACTATTCTACATTGTGATGCAGTGTCTTGGAGCTATCTGTGGTG CTGGTGTGGTGAAGGGCTTTCAGGGTAATGCTAGGTATGAGTTGTTCAAAGGTGGTGCTAACTTTGTGAACCCTGGATACACCAAAGGGGATGGCCTTGG AGCTGAAATTGTTGGCACTTTTGTTCTTGTCTACACTGTCTTTTCTGCCACTGATCCTAAGAGAAATGCTAGAGATTCTCATGTTCCGGTTTTGGCTCCA CTTCCAATTGGATTTGCTGTATTCATGGTTCATTTGGCAACCATCCCAGTCACTGGCACTGGCATCAATCCTGCAAGAAGTTTTGGAGCTGCTGTTATCT ACAATAATGATAAGGCCTGGCATGACCATGTGAGTATCCTTTTCTTGAATTTAGTAACATGCTAGCACTTCTATATGCATAAAATGTTAATGATTCCTAG AAGTTTTCTCTACTACTAATTAATATAATAACATAATGGATATATATTATTAATAATTAATATAATGATATAATAGAATGGGTATAATGTATTATTACCA ATACTAATATAAAGTATTTAGTATTTTAGGACTCAAAATTAATAGTTAGTAAGAAGACACAGTAAATAATAAACAGAGACCCACACATAGATTGATACAT ATTTGTGCAATGGTAGATCATATATCTATTGTGTAAAGTAAAAAGGAAAAATAAAGTTGCAAAATTTTATCTAAGATTATGTTCTTTTTGTCTGTTTAGT GGATCTTTTGGGTAGGACCATTCATTGGGGCAGCAATTGCAGCTTTCTATCACCAATTCATTTTGAGAGCTGGTGCTGCTAAGGCTTTTGGATCATTCAG GAGCAACCCTACTGTTTGAGTTATATCTTCCTCTTCATGGATTTAATGGAAAGAAGAGAAATAATATGTTTATAGGGCAAGTATAATAACGTGAAATGCT TGTGCTTGTATTGCAAGGTTTCTTTGAACCTCACTTACCTCACCAGCAATACAAATAGTATGAGGGGTTTGAAGATGTAGTGGATAACTGTAAAATTTTA TGTCTATTTCAAGATTGAGGAGCAATTTGTAATACCCTTTTTGTCTTTATAAGCACTTTCATCTATATTTCCTCGTATGTCATCTTTAAACTATTTTCGT CTTGTTTTATGATCTTTGTACTCTATATTTATGGAAAAAATATTTAAATTATGCACACAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_169462; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_355365
| Blastp | Aquaporin PIP 1-3 from Oryza sativa with 84.03% of identity |
|---|---|
| Blastx | Probable aquaporin PIP-type pTOM75 from Lycopersicon with 84.35% of identity |
| Eggnog | Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)(COG0580) |
| Kegg | Link to kegg annotations (4331194) |
| CantataDB | Link to cantataDB annotations (CNT0000345) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_013447045.1) |
| Pfam | Major intrinsic protein (PF00230.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |