| Id Trinity | TRINITY_DN49449_c0_g1_i28 |
|---|---|
| Name Transcript | Ll_transcript_354140 |
| Sequence | TTTTATTTTTGCTATCTCTATATGCACCCATTTAAGTGTAGGTTTTGAATTGTTTCCACCATGATAGTTACTAGTTATGCACTAGAATACCAATTAGGGC TCGCCAAAAACAATGTGGACTCTTTTATGTGATATATTGAGATGGATGAGCCCAACAAATTCAAACCCTATTTGTATGGATTTTATTTTGGCAGAGATTG GTCCACTTAAGTTAACGCTGATTGATGGAAAATGGGAATATGCCATTTTAGAAATGCGTTTTGTTCTCCAGATTCGTCAAAAATAGTAACAATTTAGTAA AATTTAGTCAATTTGTAACTGTCTTCATCTAATCTCATTCTTTCCTATCTATAAATAACAAAAACAAAAACAAAAAAGGAGTCATTTGCAATTTGCAGCA ACAACCGCAAATCGCAAACTCTCTTTTCACCATTCAACGATGTCTCTTCCTCCTTTCTCATCGCTGCTATTGCTATCTCTCGTGTTAGCTACGGTTGCGT TCGTTTCTTCAATCGAAGAGTTCGATTTGGATTTGGATTTGGATTTGGAAAGAAGAGGACATAGACAGAGAGAGTTTGATTATTTCGCTTTGGCGTTGCA ATGGCCTGGTACTTTCTGCCAACGTACACAATATTGTTGCTCCTCTAATGCTTGTTGCAGAGGATCCAATGCTCCAACAACATTCACCATACGTGAGTAT CACTTTTAAAATATGACGTTGCTGTTTCGAATGTAGACCATATGGAATAGTAGGTAGCATAGTGCTATAAAGGATAAACTCTCACTATGTGCATTGTGTA GGGAAGGGTTGGACCCATTTTATGGCTCTGTATTAGGCAGCCTTACCTTTTGTTGATACGAGATTGAGTTCACCTATGATCTCATTGACTTGTGGATTGT ATAGCGACCACTCCCATCTGTTGCACAAAGACCATTATGGGGTCTAGAAAAATTCTTAAAATATGCCAGTGTTTCAAACCATTGAGAAATTAATTTGATG TGTGCCTTTTTCCCTTGGTCAATCCTTTTCTCACTCATTTCTTCTGGATCTCACCTTTTGTGTTTACATTGTTTTTATTTTAAAAATTAGCAGAGGTAAG AAGTATTTTGACCTTTTACATTTCTATTCTGAGTGTGGAGATCCTTGCAAGAGAAACTTAACGACATCATATCTACTTTATGATAGATGGACTCTGGCCT GATTATAACAATGGAACCTGGCCAGCGTGTTGCACTAAATCTTCTTTCGATCCAAATGCGATATCAACATTGACTGATGCTTTAGAGCAATATTGGCCAT CATTAAGCTGTAGCAAACCATCATCATGCCATGGTGGGAAAGGTTCATTTTGGGGTCATGAGTGGGAGAAGCATGGGACATGCTCATCACCTGTGGTTTC GAACGAATATGATTATTTCCGGACAACGCTGAATGTCTATTTCAAATATAATGTCACTGTATGTTCACAGATCATAGATTTTTTTTTGTATCCAGATGTT TCATTATTGTTTCTCTAGGGCTCTAGGCAATAAGCTCATTGCTCATGTGATATGATAATCAAAATATGATGATAAGTTTAACTGATTGTATTTCTACCTT TTTGGCCCATTGCCTATTCTCAGTTTTTGTGCTAGACAAATTATTTAGCTAGCCTATATATGTACTTAGTAGTTAGTATGTTAAATGGCATTACATGCAG CTATTCTTTTTTTATGTTTATCTTGCTCCCTCTTCTTACCCTAAAAAATTAGCAAACTTTTTGCTGATTACTCAACCAGCCATTCCCTCTACAATTGATA AGATTGGTGTTGATTAATGAACTATTTAATTTTTGCACTGGGTCTCCTAACTGCCAATTGTATTTGAAAAACATTTTATTGCTGTAACCAATTACTTTCT TGCATCTATATCAGGACATACTCTGACTATTGTGTTTCTCAATTTTCCAGAAAGTTTTAAATGAAGCTGGATA BLAST |
| Tissue | pods |
| Gene name | LI_gene_169467; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_354140
| Blastp | Ribonuclease 2 from Arabidopsis with 72.83% of identity |
|---|---|
| Blastx | Ribonuclease 2 from Arabidopsis with 72.34% of identity |
| Eggnog | ribonuclease T2 activity(ENOG4111M7G) |
| Kegg | Link to kegg annotations (AT2G39780) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460218.1) |
| Pfam | Ribonuclease T2 family (PF00445.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |