Ll_transcript_354628

• Id Trinity: TRINITY_DN49453_c0_g1_i1
• Name Transcript: Ll_transcript_354628
• Sequence: ATTCCGGTACTGCATAAAGTATAACTATCGAATTGACTAAAGGAGTCGAAGACAATGATTGTTTTATTATAAAAAGAAAAATGATGGCAAAGATTGAAAG AGATTGGTCTATTATAGCTGGTAGTCAAAAAAAGAGGAGAGCATGTAGAAGAGATATTCAGGCACATAGAGAGCAGTTGGCAACAGGCAAAAATTCAACA CCCCATATACCTATTTTCACATGATTTCTAATCACTTTTTTCACAAGGCAAACTACTGCAAAAGCAAACTTTTTGAATGGTGTTCTAAGATGTATATGTA TGGGTTGAAGTAAAGATCATATTTTGCTAGCTTTCAACTGGTTTGTTGAGATGAAAGGTGTTCTTTCCATCAGCTTCTTTCTTTGTTGCTTGCTTTTGCT TTTGGATTCTTCACTTTCACTTCCTCTATGCCTTGATTCAAGGGCACCCTTTACCTTGAATTCAACACTCAAGTTTTGTCCTTATAATGGAAGCACGTGT TGCAACCTTACTCAAGATGCACAAATAAAGAAGCAATTCCAAGGCATGAACATATCTGATCCTAGCTGTGCCTCGGTTATGAAGTCCGTACTTTGTGCAA GTTGCGATCCATTTTCGGCGGAGCTATATACAGTTCAATCATCACCTAGATCAGTTCCTGTTCTTTGTAATTCCACCATACCAACAAATTCTTCCCAGTC AAAGACAGAAGTGGAGGACTTCTGCTCTCAAGTGTGGGACACATGTCAAACTGTGTCCACAACAAACTCTCCATTTGCCCCTTCATTACAAGGTCAAACA GGAGGTGCACCAACTGATAAAAATACAACCAAACTAACTGAATTATGGCAGTCCAAAACCGACTTTTGTAACGCATTTGGTGGAACGTCCGATAATTCAT CAGTATGCTTTGAAGGGATACCAATTGCACTGAATAAAACTGAAACTCCTATTATTCCTCCACATGGCTTGTGCCTTGAGAAAATTGGTAATGGATCTTA TCTCAACATGGTGGCGCATCCTGATGGCACTAACCGTGCGTTCTTCTCTAATCAAATGGGTAAGGTTTGGCTAGCAACACTTCTGGATGAGGGATCGGGA AGAACATTGGAGCTTGATGAATCAAGTCCCTTTGTTGATCTAACTGATCAGGTTTATTTTGATACTATGTTCGGAATGATGGGCATGGCCTTTCATCCAA ATTTTGCAAAAAATGGTCGATTCTTTGCTTCGTTTAACTGCGACAAATCCAAGTGGTCAGGATGTAGTGGACGATGTTCATGTAATTCAGATGTTGATTG TGATCCATCAAAGCTAGCCACTGATCAAGGTGCTCAACCATGCCAGTATCAAACTGTTATTGCAGAATACACTGCTAATGGTACCACATATCAGCCTTCC TCGGCTGAAAGTGCTAGTCCTACCGAAGTGAGAAGGATATTTACCATGGGTCTCCCATTTGCATCGCATCATGGAGGTGCAGCAGAAATTAGCAAACTTG GACTTTGGGGTAACTACTCCACCCCAAAGGATAATCCATATAGTGAAGATAAAGATCTGCAGCCTGAAATTTGGGCACTGGGACTGAGAAATCCTTGGCG TTGCAGTTTCGATGCAGAAAGATCTTCGTACTTTTTGTGTGCAGATGTCGGACAGGATCTTTATGAGGAAGTGGATCTCATCACAAAGGGCGGCAACTAT GGCTGGCGTGCTTATGAGGGGCCCTATCTATTCAACCCTACACAATCACCTGGAGGCAATACCTCCCTCAAATCCATAAATCCGATTTTCCCAATTGTCG GATACAACCATTCTGATGTGAACAAAAACGAAGGATCGGCATCGATCACTGGTGGATATGTCTATCGATCTACCACCGATCCTTGCACATATGGAAGGTA CTTATATGGAGATCTATATGCTGGTGCTATATGGGCAGCCACTGAAGACCCCACAAATAGTGGAAATTTCAGCACTAACAAAATCCCATTCAGTTGTGCA CAAGATTCTCCAATCAAATGTGACTCTACACCGGGAAGCTCCCTTCCAGCTTTAGGCTACATCTTTTCATTTGGTGAAGACAACATGAAAGATATCTATA TCCTTGCAAGCACCGGCGTTTACCGGATTGTTCCTCCGAGTCGCTGCAATTATACTTGTTCACTTGAAAAGGAAACAACTACTGCAGGCCATGCTCCTTC TCCTACTTCTCCATCTCATGCTAGTAGCCGTTGGTGTAATTTCTATGGATATCTGTTTCTGCAATTTTCATCTTTCTTGCTGTTATTGTTTGGTCTTATG TAGTATGCTATGGTATTCATACTATTGAAACACAATTCTCTCACTTTAGTACCAATTCATCTTTCTTTTACGAATTGACTCTATATAAGGAAAGAACTAG ATTTTCAC
• Tissue: pods
• Gene name: LI_gene_169488;
• Additional information: details;

Expression of Ll_transcript_354628

FPKM

• PAB: 0.4
• PNAB: 0.6
• PS1: 0.2
• PS2: 0.1
• PS3: 0.2
• PW1: 0.7
• PW2: 1.1
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_354628

• Blastp: HIPL1 protein from Arabidopsis with 61.81% of identity
• Blastx: HIPL1 protein from Arabidopsis with 63.46% of identity
• Eggnog: Dehydrogenase(COG2133)
• Kegg: Link to kegg annotations (AT1G74790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417511.1)
• Pfam: Glucose / Sorbosone dehydrogenase (PF07995.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;