Id Trinity | TRINITY_DN49453_c0_g1_i4 |
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Name Transcript | Ll_transcript_354636 |
Sequence | ATTTCATGTATTATATAGGGTATTATGTATCAGGTTTATCATTAAGTATGTCTTTTAATAATAATGTAAAAAATGACCATCCCTTGTGAACTACTATCAT TCCGGTACTGCATAAAATATAACTATCGAATTGACTAAAGGAGTCGAAGACAATGATTGTTTTATTATAAAAAGAAAAATGATGGCAAAGATTGAAAGAG ATTGGTCTATTATAGCTGGTAGTCAAAAAAAGAGGAGAGCATGTAGAAGAGATATTCAGGCACATAGAGAGCAGTTGGCAACAGGCAAAAATTCAACACC CCATATACCTATTTTCACATGATTTCTAATCACTTTTTTCACAAGGCAAACTACTGCAAAAGCAAACTTTTTGAATGGTGTTCTAAGATGTATATGTATG GGTTGAAGTAAAGATCATATTTTGCTAGCTTTCAACTGGTTTGTTGAGATGAAAGGTGTTCTTTCCATCAGCTTCTTTCTTTGTTGCTTGCTTTTGCTTT TGGATTCTTCACTTTCACTTCCTCTATGCCTTGATTCAAGGGCACCCTTTACCTTGAATTCAACACTCAAGTTTTGTCCTTATAATGGAAGCACGTGTTG CAACCTTACTCAAGATGCACAAATAAAGAAGCAATTCCAAGGCATGAACATATCTGATCCTAGCTGTGCCTCGGTTATGAAGTCCGTACTTTGTGCAAGT TGCGATCCATTTTCGGCGGAGCTATATACAGTTCAATCATCACCTAGATCAGTTCCTGTTCTTTGTAATTCCACCATACCAACAAATTCTTCCCAGTCAA AGACAGAAGTGGAGGACTTCTGCTCTCAAGTGTGGGACACATGTCAAACTGTGTCCACAACAAACTCTCCATTTGCCCCTTCATTACAAGGTCAAACAGG AGGTGCACCAACTGATAAAAATACAACCAAACTAACTGAATTATGGCAGTCCAAAACCGACTTTTGTAACGCATTTGGTGGAACGTCCGATAATTCATCA GTATGCTTTGAAGGGATACCAATTGCACTGAATAAAACTGAAACTCCTATTATTCCTCCACATGGCTTGTGCCTTGAGAAAATTGGTAATGGATCTTATC TCAACATGGTGGCGCATCCTGATGGCACTAACCGTGCGTTCTTCTCTAATCAAATGGGTAAGGTTTGGCTAGCAACACTTCTGGATGAGGGATCGGGAAG AACATTGGAGCTTGATGAATCAAGTCCCTTTGTTGATCTAACTGATCAGGTTTATTTTGATACTATGTTCGGAATGATGGGCATGGCCTTTCATCCAAAT TTTGCAAAAAATGGTCGATTCTTTGCTTCGTTTAACTGCGACAAATCCAAGTGGTCAGGATGTAGTGGACGATGTTCATGTAATTCAGATGTTGATTGTG ATCCATCAAAGCTAGCCACTGATCAAGGTGCTCAACCATGCCAGTATCAAACTGTTATTGCAGAATACACTGCTAATGGTACCACATATCAGCCTTCCTC GGCTGAAAGTGCTAGTCCTACCGAAGTGAGAAGGATATTTACCATGGGTCTCCCATTTGCATCGCATCATGGAGGTCAGATACTTTTTCGACCTGATGAT GGGTATTTATACTTTATGATGGGAGATGGAGGAAGTACTGGTGATCCTTATAATTTTGCTCAAAACAAGAAATCCTTGCTTGGAAAGATCATGAGGCTTA ATATAGACAACATTCCAAGTGCAGCAGAAATTAGCAAACTTGGACTTTGGGGTAACTACTCCACCCCAAAGGATAATCCATATAGTGAAGATAAAGATCT GCAGCCTGAAATTTGGGCACTGGGACTGAGAAATCCTTGGCGTTGCAGTTTCGATGCAGAAAGATCTTCGTACTTTTTGTGTGCAGATGTCGGACAGGAT CTTTATGAGGAAGTGGATCTCATCACAAAGGGCGGCAACTATGGCTGGCGTGCTTATGAGGGGCCCTATCTATTCAACCCTACACAATCACCTGGAGGCA ATACCTCCCTCAAATCCATAAATCCGATTTTCCCAATTGTCGGATACAACCATTCTGATGTGAACAAAAACGAAGGATCGGCATCGATCACTGGTGGATA TGTCTATCGATCTACCACCGATCCTTGCACATATGGAAGGTACTTATATGGAGATCTATATGCTGGTGCTATATGGGCAGCCACTGAAGACCCCACAAAT AGTGGAAATTTCAGCACTAACAAAATCCCATTCAGTTGTGCACAAGATTCTCCAATCAAATGTGACTCTACACCGGGAAGCTCCCTTCCAGCTTTAGGCT ACATCTTTTCATTTGGTGAAGACAACATGAAAGATATCTATATCCTTGCAAGCACCGGCGTTTACCGGATTGTTCCTCCGAGTCGCTGCAATTATACTTG TTCACTTGAAAAGGAAACAACTACTGCAGGCCATGCTCCTTCTCCTACTTCTCCATCTCATGCTAGTAGCCGTTGGTGTAATTTCTATGGATATCTGTTT CTGCAATTTTCATCTTTCTTGCTGTTATTGTTTGGTCTTATGTAGTATGCTATGGTATTCATACTATTGAAACACAATTCTCTCACTTTAGTACCAATTC ATCTTTCTTTTACGAATTGACTCTATATAAGGAAAGAACTAGATTTTCACâBLAST |
Tissue | pods |
Gene name | LI_gene_169488; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_354636
Blastp | HIPL1 protein from Arabidopsis with 67.8% of identity |
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Blastx | HIPL1 protein from Arabidopsis with 69.92% of identity |
Eggnog | Dehydrogenase(COG2133) |
Kegg | Link to kegg annotations (AT1G74790) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417511.1) |
Pfam | Glucose / Sorbosone dehydrogenase (PF07995.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |