Id Trinity | TRINITY_DN49458_c2_g2_i8 |
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Name Transcript | Ll_transcript_355152 |
Sequence | AGCAACAAAGATTAGTTCTTTGATATTGTAATGATGAATGTAGCAGCATGCTACTTTCGTGCGTATTGCGGCAATTACAAAGATTACTACTCATGATGGA TATAGCAACAAAGATTAGTTCTTTGAGATTGTAACGATGAATGTATCAGGATACTATTTTCATGAGTATTGCGGCCATTACAATGATTACTACTTCTGAT AAGTATAGCAACAAAGATTAGTTCTCTGAGATTGCAGTGTAGCAGGATACTACTTTTGTGACTATTGCAGCTATTACAAAGATTACTACATAATGAATGG AGCAACAAAGATTAGTTCTTTGAGATTGTCACTATGAATGTAGCCGGATACTACTTTCGTGAATTGGCAGCAATTACAAAGATTGCTACTTTCGATGAAT ATAGCAACAGCTTTGAGATTGTAACGATGAATTAGCAGCATGCTACTTTCATGAGTATTGCGGCAATTAAAAAGATTACTACTCATGATGGATATAGCAA GACAGATTAGTTCTTTGTAAGGATGAATGTAGCAGGATACTGCTTTTGTGAGTATTGTGCAATTACAAAGATTACTACTTTTGATGAATACAGCAACAAA GATTAGTTCTTTGAGATTTTAACTTGATTGTAGCATGATACTACTTTTGCGAGTTTGCAGCAATTACAAAGATGAGCGTAAAAAATAATACCGATGTAGT TTTGTTCTTATATAGTACTATGAGTTCTGGCTTTTGATGATTGAGGCAGGCTCAGAGGTATTTGATGGAAAAGTGGTGCAATTTTTACTCATTTCAGTAA TGCCGGTTCTGATAAATTGACTGAACAATATTATATACCCAAATATAATTTAGAAATTATGAATTTCTAACTCAACAAAAAGCTTCTGGGTCGTCTTAGG GCTTTTGATAGACACTGCCACATTGTTCTTGAAAACATCGGGGAGATGTGTACTGAGGTATGTATTGTTTCTTTGGATTTAATTTCCTTGTGCTTAGTGT GTGTTTAGGTATGTATTCAATCTGCTTTTGTGAAATGAGCTAAAAAGAGTTTTTATCTCTCAAGCTTCTTTGACAAGTTTATTGATATAACCTAAAAAGA GCTTTTGGAGAGGTCAAATGAGGTTCTCACGAGTCCAAATAACTTCTTTATATGCTCTTCCTAATACCCGCGTAAGCTAATGAGCATTGTGTTTGTGTGT ACAATTTGGTGCCAAAGACTGGTAAGGGAAAAAAAAGGCTCAGCCAGTTAATAAAGACAGATTCATCAGCAAAATGTTCCTCTGTGATGACTCTGTCATC ATTGTTCTTCAGAACTCCAATGTTCTACCTATGCAAGTAATTGGTTTGGTAGTTTTTGCCTTTATGTTATCTTCATGGTTTAGACTTTCATGCATTTAGA TGTTGTTGCCATGTTGGCAACCATGAACTATTAACGAACTAACAGTATTGTTTCTTTTATTATCGGTCAGAAAGTGGGTCTGTTCAGCCCTGAAGATATA TTGGACTACATATCACGGGGTGACATATTTTGGTTAGCTCATACTATCTATTAAGGCCATACTATCTTGTATGAAAAAGTTCATAACTCTATCAAGCCCC AAATAATCCATATTCACTAGTCACTACCAATGTTATGAATAAATGATAGTGTTATCAACCTTCCCTTCCATGAAGAGAAGAACCCAGGCTGAAAAAAACA ATACAGGAGTAATAAATTAAAGTGACGTGTTACTTTCACATGTGTTAGTTAAATGAAATGTCATTTGTCATGATTATGAGTATTTTGAGGCTGATTTATG CGAATTTAACTTTTTTTCGTAAAAAATTACTTAACCATGGATAGTGACAAGCTAAACTAAAGGTGTTTGTGATTCAATTGATTTTGAGAGAGAAAAGTGA TCCAGTATATTATAGTATGGTTTGGTAAGGTTAAAGTGTGAAATAAGAGAGCCTATATTGTTTTTGTTTAGAGTGATCCTACATGATGAACACTGTTGCC TGTGATCGAGGATATTATAGCTTCAGACCAAGAACACAAAAAAATAAATATGCATTGCTTGTGTGTAATGTGAACGTCAATAAGCAAATATAATTTTACT TTACAGAATCTGAAAGGAGATATGATATATTGATATGGCGTGAGCTTTGGCGTTTTGATTTAACACTACATTGAAGGTGAGAAATGGAGAAAACGACAAG ATGAATGTTGTGAAGGTGTTATGTGTGCATCGTCATGCCACTGCATTGTTATGTAGTCGATAGCCTAGCAGTATAACTATGAAAACACAACATAAGGGAT GCATGTTTTGAAATCTGAACCTGATCTTGCCATCAGATCCTCCAAACTCAAACCAATAAAGTAAGAAAAAAGTGATTGCCAATCAAGATCTTGTGATTTC ATAATCATAGATTTGAGAGAAAACAATAATACCTACGAGGAATTATGTATAGAAAACTGTTGTTATTTTTTTTTGGGATGTTCAATTGAGATACCTTCTT TTGCTATCAGAGAAAGTTGTTACATTATGATGTTTATAAATAATGAAACTCTAAACACCTAAGCCAAAAATTGATGAATGAAAAACAAGTTTGTATCTAT ATGACATTAATAGATGCATGTCCGTAAGTGGTAGCTTCTCAATCACAAGATTCACAACTAGTGAAACTTGTGTCATTTTGTTGTTACTAAGGTTCTAGTT GTCTTATATGTCATCTATTATGCCGTTATCAGGGTTATAGTTATTATATAAGGGTTCTACATTTTCTTACCCTTGTGCATTTTTCTTACTTGTCTTTCTA TTTATGCTCCATCATCAACACAAGAATGTAAAGAAACTCTTATAGCAAGTTATTGTTTGTTACTTCCTTTGTGTCTTTCACTTAGTGCAATTTGCTACAT CCAATATTTTCTGTCACTTAAGTTATAAAAAACCCTTCTTTTCTGTCTTATATCTTGTCTCCTTTATCCTCAAATTGGAGGCAACTTCCAAAAAAAAAAT CAATAACTTTCTCTTTCTTGACCCGTTCACTTCAGTTTTCTAAACCAGAGAACCTGAAATGGGGTGTGATCACCATGTCTGTGCTAAAAGATTCAGCTTC ATCAGCATTTCTCTTTTCTTTCTGATAATTTCAAGCTGGACCCTGCAGGGATTTGTTACTGAAGAAGGTACTAGAACAACTCCCAAACAGAATGGTTTTC AAAAGATAGTACATGATGATAAGGTGGTGGTGAGGGCTAGGATAGGGTCAAGGCCACCTAAATGTGAGAAAAGGTGTAGGTCATGTGGACCTTGTGAGGC TATTCAGGTGCCTACAAATCCCCAAGCACATAATGAAAAGATCAATGTCAATCCTTCAACAGTGTCTGTAACTGCTTATGAAAAGGGTGGCAATGTCAAC TACAAGCCCATGAGTTGGAAGTGTAAATGTGGGAACCTTATTTTCAACCCTTAATTCCAATTGTACCAGAATTTAGTTATGTCAGATAATCAAGGATACT ACTCATTTTGTCAATTAATTATATTATTATTGTTATACACTTCTAAGGTAGTCTTTCTATCTTACTTTTTTAAGCCTTTTCTGTTCTTACCCCTCAAATG TCCTCACTTAGAAAAAAGGTTCTTTCTTATGTATGCCTACTTCATAGCTCATCCTCAATAGTTTCTTTGTTGGCAATTTTTAGTTGTTATCACTTGTGGT TACCAATCATTGTTCAGATTTTTGCTTATGTAACTTGCAGGTGTTGCTTTTAGTGCTTTCATTGCTCTAACTAAACAGATTCTACCAGCTTAAAATACAA AATAAGTGTTA BLAST |
Tissue | pods |
Gene name | LI_gene_169529; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_355152
Blastp | EPIDERMAL PATTERNING FACTOR-like protein 2 from Arabidopsis with 49% of identity |
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Blastx | EPIDERMAL PATTERNING FACTOR-like protein 2 from Arabidopsis with 52.94% of identity |
Eggnog | epidermal patterning factor-like protein(ENOG410YZE3) |
Kegg | Link to kegg annotations (AT4G37810) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444956.1) |
Pfam | Epidermal patterning factor proteins (PF17181.3) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |