Id Trinity | TRINITY_DN49463_c1_g1_i12 |
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Name Transcript | Ll_transcript_353646 |
Sequence | TTTATAAGCTATTTCCATAACTTCTTCTCATAAGTATGAATAAGCTCTCTCTATATACTCTTTCAAACACTCGCTTAGACAACTTCTCACAGTACTTGTT AATTTTTTACATAAGCTACATGTACTTTAATCATAAACTGTTAGGTGTCGTATGAAGTTATCCGAATAAGTTGTTCAAATAACTTTCAAATTGAAAATTG GATTTGAGAATCCTTTTCCTATCTTATTCCAGACTGCGTTTATCCGCAGGCTCCAATCAGCACCCCTGTTTCATCTGACAAGTTTTGGTTTCTCACCAAG AATCGTGCTATATCACTTCCATCCCCCTTTGACAACAAAGGCAACTATGTAATCAGTCTAAGTCAGTTAGTACGTTGGATGGGAGAAAAAGCCGAAGAGT TAGGAGTGGAAATATACCCAGGATTTGCTGCTAGTGAGATATTGTATGATGCAAACAACAAAGTTATCGGTATTGGAACTAACGATATGGGAATTTCAAA AGATGGTTCAAAAAAGGAGAATTTTCAACGTGGTGTTGAGGTCAAAGGTTTCATTTTAGATGTTTCATTCTGTCATGCATATGTTTATGTGCTTTGTCTC AGTTGGTAGAGTGAAAAGGTCCCTGTTTAACCCTTGTCTAGCTGCTCCAGCAACTTGACTATGATTTGGGTCAGTATTTGGTTGTCCATTAATCCATGTA TTTGTGAATGATATTATGTTTTTGGAAACACATGGACACAGCTGCAGCAGTTAAACTGTTATCATTTCTATGGCATACAATATTCGTATTTTTGAGACAA AATCTCACGCAATTTGCATATTTTGTCTTTGCATATAGTTTTTTAGATCTTCTTAAAGCTGATTTATACACTCAATAACTACATGAGTTTGAAATCACAT ACAGGTCGAGCGACACTTCTGGCTGAGGGATGTAGAGGTTCATTATCAGAGAAAATAATGAAAAAGTACAACCTGAGAGAGAAGGGAGGTGCAGAACATC AGACATATGCCTTGGGAATTAAGGAGGTTTGGGAAGTTGATGAACAAAAGCATCAACCTGGCACAGTACTCCACACATTAGGGTGGCCATTGGATCACAA AACATATGGAGGATCTTTTCTATATCACATGAAAGATAAACAAATATCTATAGGCCTTGTTGTTGCTTTGAACTATCAGAACCCTTTTATGAATCCTTAT GAGGAATTCCAGAAACTTAAGCATCATCCTGCAATCAAACCATTACTGGAAGGTGGAACAGTTATTCAGTATGGAGCTCGCACTTTAAACGAAGGTGGTA TTCAGGTACATTATTAATGATGGCTTCCTTTTCTTATTTGCAATGAATGAGAAAATACAGGCTTGTATGAAAAACTTCTTTACTTCGCCAGTCTCATGAG GTGTTGTATTGTTGTGAATCAGGTATATTAGCAATAATGAAGTATGCTGTATGCCAAATGGCTACTCCTAATGGTCAAGATTTCTAACGTAAAATCTCAT GGTTTTTGGTGGGTAATTAAGAACTTAAGATTGTAAAGATCCACGGACTAAGAAGCATAGACAATAACTAAGCCAAAAACACAACAAATTTGAAATGTTG AAAAATCCAAGTACTTTTGAAGTGCCACGTTGTTTATAACAACGGCACTGTTTTTTTTAAATGTTTATGCTGCATACACCATTGCACCTTGAGCAACATG TTTGCTAATTTTTACAGTCACCCATGTAAGTCATAGTTATTATCGCTGTCATTGTTGTTGATAGAGAAAGCCAACATCCATGATAAGCAAGAAAAACCTA CATCCATGTAAAGCTTAGTTCTTATTGGGTTGTCATTGTTGTTGATAGATTCATTCTTTGTTATCTTATTAGTCATCCAATTGCCTGTTATTTGTTGCCC TGTATTATTTCTTTAAAATTTCCACATTATACATATAAGAATGCGATTCTAGTTAAATTTCAGTCTATCCCATATCCGGTTTTTCCTGGAGGAGCAATTA TTGGGTGTTCTGCTGGCTTTTTAAATGTGCCCAAGATAAAGGGAACACACACAGCAATGAAATCAGGTAGTGGCATACTCAATTCTTCTGAGTTGATTTT AAGCATATTGCTAATCACTAATTTTCACTAAATTCAATTTTGTAGTTTTGGTAAAAAGAGTCTCAAATTTTCACTGTCAATGTAAATAGTCACTTTTGCA AGACACTCGGTAGCATTTGACACTGATCTAAAATATTGTCTCAATTTTAGGGATTTGCAATTCTATAGAGCCGATTATTTGGTACATTCTTAATATCTGA TGTATATCAATTTTACATCCATTCTTCCATTTGTTAAGTTGTCCTATCAATTGATTATTAATCAAACACATATTGGGCCATGGAGACCTGTCAATGGTTC TGTGTGATATGCAAATAGCGGTCTAAAGTTGCGTTTAAAAAATACTTGTTACTTCTTTTTGTAGGAATGCTTGCAGCTGAAGCTACATTTGGTGCACTTC ATGGAAGTCTGGGCATGGATACGTACTGGGATGCTTTGAGGAATTCATGGATTTGGCAAGAACTATATAAAGCTCGGAACTATCGGCCAGCCTTTGAGTA CGGGCTTATTCCAGGACTGGCCTTAAGTGGTCTGGAACACTACATATTCAGGGGGAGGTATCCAATTACATTGAAGCATGGTAAACCTGATCATGAAGCT ACAAATGCTGCACAGCTGCATTCTCCAATTGACTATCCAAAGGCAGATGGTGTTTTGTCCTTTGATGTACCTACCTCTCTGCACAGGAGCAACACAAATC ATGATCATGATCAACCTCCTCACCTTCGTCTGAGAGACCCAAAGATTCCTGAACTTACAAATTTACCAGTGTATGCCGCTCCTGAGACACGATATTGTCC TGCACGAGTATATGAGTATGTCGGTGAGCAGAGTCAGTTGAAATTGCAGATTAATGCACAAAACTGCTTACATTGCAAGGCATGTGATATTAAAGATCCA AAGCAAAACATAGAGTGGACAGTGCCAGAAGGGGGTGGAGGCCCGGGATACTCAGTCATGTAGATCCAGAGATCAATCCTAGTAGTATCGGCCCCGAGGT TAAGTGAAGTGTTGCGCATTTTCCACAATAAAAAAACATTCGTTGTATGTACCAAACAAGAAAAATATTGTTTCTTCTACAACATTATATCCAAAATGTG AGGGGCGATCAGTTAAAAAAATATGAACTAGAATACTACTCATGATAATTTACTAATATCCTTGTGTTGTTACCGATGAATAATCATGTGAAACAATGAA GTGCGATAGAATTACGTTTTCAAATTGAAAAGTAAAAACCAGAGA BLAST |
Tissue | pods |
Gene name | LI_gene_169569; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_353646
Blastp | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial from Arabidopsis with 77.39% of identity |
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Blastx | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial from Arabidopsis with 77.5% of identity |
Eggnog | geranylgeranyl reductase(COG0644) |
Kegg | Link to kegg annotations (AT2G43400) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457832.1) |
Pfam | Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S (PF05187.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |