Ll_transcript_353671

• Id Trinity: TRINITY_DN49463_c2_g1_i6
• Name Transcript: Ll_transcript_353671
• Sequence: CTCAACAATACTTCTTTGAGCATGCCCTCAATATAACCCATGTCTCCGAGACAAATCTTATCCTCAAGATTGAAAGCAGGAAAACAGCCTCAAATGTTGT CCTACATTCGCATGAAGCTTCTAATGAGCTTTGACCATCCCAATGGACTAAAATTTCTTCATTTGTATTCTTTCCACTAGGTATTAAATGATGGCAAATA ATCAGAAATGGTGTTGCACCAGTAGTGTCAATGATGTTTGCAACACGAAGATAACATATTTGCATATTTGATTGGCAAGGGCAAGGTTTCAATAGTGAGA CATGAAAGACCGGATGGATGTGAGTTGTGTCCAGTAGTTCAAGCTCATATGCAACAGTGTCGATGCGATGTAGGATGCAAAAAGGGTTGTAAAACCTTTT TGCCAAATTTTGTGAAGAGTGACGGTGCATGGAGATTTGTCGGTAAGGTTGGAGTTTGAGGTAAACCCATTGACCCTATGTACATTCCTTTTTCTTGTCA CTTGGAATTTGTCTGTTGAACCATGCATTGTCTAGCTCTTGCAAGGTTATGTTTTAACAACTTCAATGTGTCATTTCTTTTGGATAAGTTCTCATCTAGA GAGGCAATTTTAGTGGAAGCCATAACATAAGATATTAGTGATGGTAGGGCACGATCATAATGAGCTTAAAATGGAGTCATCACAGTGACTGAGTGATGAG AAGTTTTATACCAAAATTCAGCAAGTGGATGGTAGATATGTTTCCAAGCAACGATTAAGGACTTCAGTCTGACCATCAGATTGAGGATGATAAGAATTGC TTACTGCCAATATAGTACCGAGAGATTTAAACAATTCTTGGCTAAATTTACTAATGAATATTTTATCCTTATCACTAACCATTGTTTTTGGAGTTCCATA GAGATAGGGAATTTCAGAAAGGAACACAGTGGCAAGATATACTGCTAGAAAATGTGTTAGCAAAGCAATAAAATGAGCATACTTGGTTAGGCAATCAACC ACTACCCAAATGACTGTTTTGTTTGAAGAAGGTGGTAAATTTGTGATGAAGTCCATCGATATAGCCTCCTAAACTTGTTGGGGAATTGGAAGTGGTTGTA GAAGGCCATAAGAAGCTTGAATATTATCGTTGTTGTATTAGTAAGTAGAACACGTGTTGATGAAAATTTTCACATATGCATACATTCCATGCCAAAATAA TGAATGGTATTCTTCCAACAAAGAAGGAATGAGATCTGCATCACGAGGTATGAATATGTGTTCTTGGAAATAAATAATTCCATACCTATAATGAAATTTC TGCTACATTGCTGAATTCTCATGAAGTTTTGATAAAATTGTTTCCCCATAGGATGATCAACATAAAATTGTTGGAGTTGATTGAATAATGAAAAAAATGG GGAACTGACAGTGGTACAAATTGCAGTATATGTTTCTTTAAGTTTGTGGGACAAGACACCAGCCACAACATTTTCCTTTCAAATTTTGTAATGAATCTTA AAACTATATCCAATGAGTTTCGTTAACCATTTCTGCTGCTCTGGTGTCTGAATAGTCTGGGTCATTAAATTTTTTAGGCTTTTGTGATTAATATAGACAT GAAAGGTATTTCCCAATAAATGTTGACATTATTTTTTATTGCCTCTATAACAACAAATAATTCTCGCACATAGGCAGAGGATGAACATAACTAAGGGCAC ATCTTTCGGCTAAAGAATACAATTGGGTGACCTTGTTGGGAGAAGACATTTCCTACTGCCACACTAGAAGCATCTATGGTGACATCAAAAGGAAGAGCAA AGTCAGGAGGCTTTGTCACACGTTTGGGTTTATTTGCAGCAAATGAAGACCCAATCTCAGCAATACTTCTTTGTGCAGTAGGCCCCTCCGTATCAATGTA CTTGTACAAATGTTGTATCCAATTTACGAAAGAGATTGATAAGATCGAATCAAACCTAAAAAGACTTAATATTCAAATTCTTCTTCGAGATTTTGCATTA CCTTACTATTTTCTTCTCTATTGTAGGTAAAACCCCATTATCTAACAATTTCTTCAAAGATTGAGAGGGATATTTGTACTTCGTAGTATCCTGAGGAAAT ATTGTAGATTTAGATGGTGTGAAACAGAGATTCACTATCCCTTTTTCGGTTCTCTACAAAAATTGCTAGGAAAATTAACTTGTCTTAATGAACAAGTACA AGCAAGATTTGCACAATGACAAAATAAATGGAAAAGGAATAGATTTCGATGTAAATATTGCCATCCTACTTCTATAAAGATGATTAGATTTTAGATGCAT TTGTGGCTTGTGATTGAAGCTACAAAATTTGATGAGTACTCAAATGTATTATTGGCCATAAAAATTAGTGGCAACAAAATTCCAGTATATGCTTTGCCTT TTATGCAAAGAATCTACTTTGCCC
• Tissue: pods
• Gene name: LI_gene_169573;
• Additional information: -

Expression of Ll_transcript_353671

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.3
• PS2: 0.5
• PS3: 0.2
• PW1: 0
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_353671

• Blastp: Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 42.48% of identity
• Blastx: Transposon Tf2-8 polyprotein from Schizosaccharomyces with 28.78% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YIL082W-A)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423049.1)
• Pfam: Integrase core domain (PF00665.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;