Ll_transcript_354921

• Id Trinity: TRINITY_DN49473_c0_g3_i6
• Name Transcript: Ll_transcript_354921
• Sequence: TTCTTTCCCCATGAATTTATTATGTGACTGATCTGATTATAACCCCTTTTTATGTTTATTATTTTTGATGTCTATCTGATTAGTAATATGTGATTGTAAC AGCAATGCTATTATGGCTGATTACTATGGGCCTTTTGCTGCTCTACATTCTTTGTTATGGGAAGGAGCTGAAATCAAGCAATTTCATGAGCATATATTGG GAGTGGAGCAGAATTTGAACACAACTCCTGCGCTATTGCTGTCCTCATCCGTTTCTCCATAGACCTCATCAGTGCTCACTTGAATGAACTTCCTGATCTG GCCAGTTACCTTGCAGGCTTCTAATAGGACAGGAGTACCATATATGATGTTCTTCGTGAACTCGAAACTATTACCAAAAGAGTTGTCAACCTGGGTTTGA GCAGCACAGTGCATTATAGTGTCGATAGACTCCGTGATGAGAAGGTAATCAGCACTACCAATATCACTCTTCACAAATTTGAAGTTGGGAGATGGTTTTG AAGGAATGAGATTCTTCAGATTAGAACAGTAATCAAGTTTGCCAAGGACAACCATTTTGTAGTCAGGGTCGCTCCGAACAAGCTTGTTCGCGACATGAGA TGCAATAAATCCAGCTGCCCCTGCAATGAGGATATTCTTTGGGGTATGTGAACCCATATCTGGAACCTTCTAATTATGGATGTAGATCCAGAGAGGAGAA GAGCGAAGATTTTGGAATAGGAAATTGAAGAATGGGAAGGTGGTAGATTATGGAGTGATGAATCACCTTCTATGTGTGTTATTCTTATGTAGAGAATACT TGCTTATTATAATGCTGATTATTTTTTAGGATAGTGTTAACTATCTCGACTAGGGATTCATTTGGCAAATTAATATAAGCCAATAACTGAAAATTGAATC CAAAGAAGGTTTCAAAGTTATCTTGTCTTATTTATCAAAAAAGATGATGGCTGCATTGATTTATATATATAATGCAATTAGTAAGGGGCC
• Tissue: pods
• Gene name: LI_gene_169634;
• Additional information: -

Expression of Ll_transcript_354921

FPKM

• PAB: 2.5
• PNAB: 2.8
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 6.4
• PW2: 0
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_354921

• Blastp: Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 from Arabidopsis with 83.22% of identity
• Blastx: Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 from Arabidopsis with 83.22% of identity
• Eggnog: dTDP-glucose 4-6-dehydratase(COG1088)
• Kegg: Link to kegg annotations (AT1G78570)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449231.1)
• Pfam: RmlD substrate binding domain (PF04321.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;