Ll_transcript_354779

• Id Trinity: TRINITY_DN49475_c0_g1_i19
• Name Transcript: Ll_transcript_354779
• Sequence: CTTCTATCAATCATAATTTTTTCTGTTCTAAGTGAAACAGATACTCGAATAGAAGAAAGTATGGCATTTGCAGGAACAACCCAAAAATGTATGGCTTGTG ACAAAACAGTTTATCTGGTTGATAAGTTGACTGCAGATAACAGAGTGTACCACAAAGCTTGCTTCAAGTGTCATCACTGCAGAGGAACTCTTAAGCTTGG CAATTACAACTCTTTTGAAGGAGTTCTTTACTGCAGGCCACACTATGACCAAACAATCAAAAGAACTGGTAGCCTTGACAAGAGCTTTGAAGGTAACATA TAATCAAGAATCAAAATAATGTGAACATTATTTTCTTCTCACTAACTCAACCTCACTACTTCCTTTTACCTGATTAGGGACACCAAAAATTGCTAAACCA GAAAAAACCAGTGAAAATGAGGTAATTAATACTAGACTAAATATTTACTTCCATCCTTCAAATTTTTTGCGTATATCAATTTGGTCTCTGCAAAATTGAA AAACCCGAAATGGTCCTGAAAAATATCAAATCTGAGTCAAATTGCTCATTTTTAGCATTTTTATGACCACTAGTAGAGATTATTTTGATTCACATTTATA ATCTCTAAGTACTAGTTTGTACTTTTACTTTTTCAAACACCAAATTGATATGCACGAAATTTTTTAAGGACTCACTCTCTATACTAAATCTTGGTGCTTG AAGTGCACAACAAAAAAGTCAGATTTCTAACATTTATCTGTTTTTTGAGCTGTTTTAATCAGAAACCTGCAGCAGCCAAAGCCTCAAGTATGTTTGGTGG AACCAGGGACAAATGTGCTGGTTGTCAGAAAACTGTGTATCCCACTGAAAAGGTTACAGTGAATGGAACTCCTTACCATAAGAGTTGTTTCAAATGCTGC CATGGAGGATGTGTTATCAGTCCTTCCAACTACATCGCACACGAGGGTAAACTCTTCTGCAAACACCACCATATCCAACTGATTAAGGAGAAGGGAAATT TAAGCCAGCTTGAAGGGGATCAAGAGAAGAATGCTGTGCATGAGAAAATCAATGGTGAAGTTGCAGCCTAGACATGAAATGCTTGACAAAAGAGTTTTGA GACCATGAAACTTTTCCCTTTCTCAAGTTCCTTTTTATCTGCACAATAAGTTTCTGCTATCTTTCATGCTTTGCTATATTACTTAGAGTCCGGGAAGTTC TTTACCTGTGACAAATATGGTATTTCATTTTTTCTTAGTTGAAGTGTGTGTGGATCTTCATCACTTTGTGTTATGTTGTGGATTAAATGAGACAGCAAGA GCATTTGATTCCCAAAGTGTGATTCAGTAGTTCATGCTATAACACTTCTTAAAACTCATTCACTTCCTATTTGGCTATTTCATATCCTACATTGATCGGA CTTAATCACATG
• Tissue: pods
• Gene name: LI_gene_169643;
• Additional information: details;

Expression of Ll_transcript_354779

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0
• PS2: 0.1
• PS3: 0.5
• PW1: 0
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_354779

• Blastp: LIM domain-containing protein WLIM1 from Arabidopsis with 91.03% of identity
• Blastx: LIM domain-containing protein WLIM1 from Arabidopsis with 77.32% of identity
• Eggnog: Microtubule associated monoxygenase, calponin and LIM domain containing(COG5069)
• Kegg: Link to kegg annotations (AT1G10200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436961.1)
• Pfam: LIM domain (PF00412.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;