| Id Trinity | TRINITY_DN49475_c0_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_354780 |
| Sequence | AGAAAACAAGATATATAGAGTTAAAAAAAGGTTATCGTGAATAAAAAACATTTTGTTGCAAAGTCTACTTTTGTCTCCAGAATCTTGTATTTGCCACATT TCACCACCATTTTCCTTATCTCATCTTCATTTCTATCCTCTAACCCTGTTAGTTAGTGACAGCTCTACTATCTATCTATATTCATAGAGAAACACAAACT CAAATACAAACAAATATGGCATTTGCAGGAACAACCCAGAAATGCATGGCTTGTGATAAAACAGTTTATCTGGTTGATAAATTAACTGCAGATAACCGAG TTTATCATAAAGCTTGCTTTAGGTGCCACCACTGCAGAGGAACCCTCAAGGTCTCTCTCTCTTTACATATATATATATGTATGTATGTGTGTGTTTATAT ATTATCCGATCTTCTTGTGTCTGGTATTTGTATATATAGTAATAATTCTTTATGATTATTTGTATATTTGGATGTTGTCTTAATTTATGTTCACCAGGAT TTTATGTTAGTGAATTTTAATCTTGCTTGTGAAATTAAAAATGAAAAACCATTCAACTATTAGAAAATCTATATATTACTCTCAGCCATTTTCTTTTTTG TTTTGTTTTGTAAGGTGGATCCCATTATGCCCTCTCCCTTTTACTGTTTTCTAATTGCACACATGAAATTGATTTTGCATCCATCTCTTAAGGCATGGTA CGAGATTTAAGTATGTAAGAAGTTATATGACTCGAATCCAACAAAATATCTCCCAACTATTCCACCCTGTTTAAGTAAAGTTGCTAAATTTTGGTTTACT AGAATTTTTTTGTTTTCATGAATAAGTTATATGACTCGAATCCAACAAAATATCTCCCAACTATTCCACCCTGTTTAAGTAAAGTTGCTAAATTTTGGTT TACTAGAATTTTTTTTGTTTTCATGAATAAGTTTATTGACAGATTAATTTATCTGCAGCTTAGCAACTATAACTCTTTTGAAGGGGTTCTTTATTGCAGG CCACATTTTGACCAATTGTTCAAAAGAACTGGAAGCCTTGATAAAAGCTTTGAAGGTACACCAAAAATTGCTAAACCAGAAAAAGCCAGTGATAACGTGA AACCTGCAGCAGCCAAAGTCTCAAGTATGTTTGGTGGAACCAGAGATAAATGTACTGGTTGTCAGAAAACAGTGTATCCAATTGAGAAGGTTACTGTGAA TGGAACTCCTTACCACAAGACATGTTTCAAATGCACTCATGGAGGATGTGTTATAAGTCCTTCCAATTACATTGCACATGAGGGCAAACTCTACTGTAAA CACCATCATATCCAATTGATCAAGGAGAAGGGCAATTTAAGCCAGCTTGAAAATGACCATGAGAAGAGTGCAACTCATGATAAAATTAATGGTCAACAAG TTGCTTCTGAGACATAAATCCTTGAGTTTTTTTTACATAAGAGTCTGAGAATATTCCTTCTTTTCAAGTTCCATATTTTGTACACCATATGTATTATGTC ATTCCCCTTGTTTACCATTATCTGGAGTTACAGTTTCTTGGAGTCCAGAAAGCTTTTTGCTTGTGTTGTGACAAATATGATATTCTTGTTTTTTTCAAGT TGGTATGTGTTGATCTTCATTATATGTTTTAGGTTGTTGTGATTGTGAGGTTGTGGATAATATCATTATTATGATATACTAAAATGAGACTTCAGAAAAC AGTGCTATTGAGTTTCATTTCAAAGCTACAAATTGTGATCACATACCATGAATGCACTCAACCTGATTTCCCATCTCAATTCAACAAATGCAAAGTCCTT CCTCTGAAATCTGAATCCACGâBLAST |
| Tissue | pods |
| Gene name | LI_gene_169643; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_354780
| Blastp | LIM domain-containing protein WLIM1 from Arabidopsis with 79.31% of identity |
|---|---|
| Blastx | LIM domain-containing protein WLIM1 from Arabidopsis with 79.31% of identity |
| Eggnog | Microtubule associated monoxygenase, calponin and LIM domain containing(COG5069) |
| Kegg | Link to kegg annotations (AT1G10200) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416279.1) |
| Pfam | LIM domain (PF00412.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |