Ll_transcript_354782

• Id Trinity: TRINITY_DN49475_c0_g1_i21
• Name Transcript: Ll_transcript_354782
• Sequence: TCTTAAGCTAAGCAACTACAACTCTTTTGAGGGGGTTCTTTACTGCAGGCCACACTTTGACCAAACATTCAAAAGAACTGGTAGCCTTGACAAGAGCTTT GAAGGGACACCAAAAATTGCTAAACCAGAAAAAACCAGTGAAAATGAGAAACCTGCAGCAGCCAAAGCCTCAAGTATGTTTGGTGGAACCAGGGACAAAT GTGCTGGTTGTCAGAAAACTGTGTATCCCACTGAAAAGGTTACAGTGAATGGAACTCCTTACCATAAGAGTTGTTTCAAATGCTGCCATGGAGGGTGTGT TATTAGTCCTTCCAATTACATTGCACATGAGGGAAAACTCTACTGCAAACACCATCATATACAACTTATCAAGGAGAAGGGTAATTTAAGCCAGCTTGAA GGTGATCAAGAGAAGAATGGAGTGCATGAGAAAATCGACCGCGAAGTTGCGGCCGAGACATGAAATGCTTGAAAAAAGAGTTTTGAGAGTAAGAGAGTTT TCCCTTTCTCAGGTTTCATTTTATATGCACAATAAGTTTCTGCTATCTTTCATGCTTTGCTATATTACTTAGAGTCCGGGAAGTTCTTTACCTGTGACAA ATATGGTATTTCATTTTTTCTTAGTTGAAGTGTGTGTGGATCTTCATCACTTTGTGTTATGTTGTGGATTAAATGAGACAGCAAGAGCATTTGATTCCCA AAGTGTGATTCAGTAGTTCATGCTATAACACTTCTTAAAACTCATTCACTTCCTATTTGGCTATTTCATATCCTACATTGATCGGACTTAATCACATG
• Tissue: pods
• Gene name: LI_gene_169643;
• Additional information: details;

Expression of Ll_transcript_354782

FPKM

• PAB: 14.2
• PNAB: 66.8
• PS1: 27.6
• PS2: 26
• PS3: 33.2
• PW1: 55.6
• PW2: 75.1
• PW3: 78.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_354782

• Blastp: LIM domain-containing protein WLIM1 from Arabidopsis with 80% of identity
• Blastx: LIM domain-containing protein WLIM1 from Arabidopsis with 80% of identity
• Eggnog: Microtubule associated monoxygenase, calponin and LIM domain containing(COG5069)
• Kegg: Link to kegg annotations (AT1G10200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436961.1)
• Pfam: LIM domain (PF00412.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;