Id Trinity | TRINITY_DN49475_c0_g1_i7 |
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Name Transcript | Ll_transcript_354755 |
Sequence | AAAAAGTGCTTTGGGAAGATGTTTAGAGACAGAAGGCTAGTGAGGTCTTGTTGGTAGGGTCATGCTTGATACCTCTACTTTACTTTACATATCTTCATGT TCCAAAATGAGAGTCACTTAACCAAACTTTGATAATTATATTATGCAATCAATCCGAAAATGGAATTCTATTATACTTCAAGTGCTATAGCCATCCACAA AAATCACAATTGTCAATAAGGCCAACCAAATTAGAAGTACAAACAACATCAGAAACTCAAATAAACTCACTCATATATCATACCCTTATTTCTTTTGAAC TTGGTGAGGTGAGAGGATAAGAAGAAAATATGGCATTTGCAGGAACAACCCAAAAATGTATGGCTTGTGACAAAACAGTTTATCTGGTTGATAAGTTGAC TGCAGATAACAGAGTGTTTCACAAAGCTTGCTTCAGATGCCACCACTGCAAAGGAACTCTTAAGCTTAGCAACTACAACTCTTTTGAGGGAGTTCTTTAC TGCAGGCCACACTTTGATCAAATCTTCAAAAGAACTGGTAGCCTTGACAAAAGCTTTGAAGGGACACCAAAAATTGCTAAACCAGAAAAGAGCAGTGATA TTGAGAAACCTGCAGCATCCAAAGCTTCAAGTATGTTTGGTGGAACAAGAGATAAATGTGCTGGTTGTCAGAAAACAGTGTATCCCACTGAGAAGGTTAC AGTGAATGCAACTCCATACCATAAGATTTGTTTCAAATGCAGCTATGGAGGATGTGTTATCAGTCCTTCCAACTACATTGCTCATGAGGGAAAACTCTAC TGCAAGCACCACCATAACCAACTGATTAAGGAGAAGGGAAATTTAAGCAAGCTTGAAGGTGACAAAGAGAAGAATGCAGTGCAGGAGAAAATTGATGCTT AAGTTGCAGCTGAGACATATTGCTTGAAAAATGAGTTTTGAGAGTCTGACAATTTTGCCTTTCTCAAGTTCCATATTACAGCACAATAAGCTTTTTCTAC CTTTCATGCTTTACTATTACTTAGAGTCTGGGAACCTCTTTACCCGGAATAAATATGGTATTCCATTTTTTCTTAGTTGAAGTGTGTGGATCTTGGTCAC TTTTGTTCTGTTATTGCTAGTTTGTGGATTAAATGAGACAGCAAGAGCATTATTTTCATAAAGTGTGATTGAGAAGTTCATGCTAAA BLAST |
Tissue | pods |
Gene name | LI_gene_169643; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_354755
Blastp | LIM domain-containing protein WLIM1 from Arabidopsis with 81.05% of identity |
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Blastx | LIM domain-containing protein WLIM1 from Arabidopsis with 81.05% of identity |
Eggnog | Microtubule associated monoxygenase, calponin and LIM domain containing(COG5069) |
Kegg | Link to kegg annotations (AT1G10200) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429844.1) |
Pfam | LIM domain (PF00412.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |