Ll_transcript_355205

• Id Trinity: TRINITY_DN49476_c1_g1_i2
• Name Transcript: Ll_transcript_355205
• Sequence: GCCCAACAAGCACACGAAACTACGTCGTTTACACAGAACAAATCACCAACCTGTTATCTCTTCCTCACGCCACCCTCTTCATCGCACTGTATCCAACAAT TCTATCGTTTTTCATCTTCTTCCGCTCAATGAACACTCTTCATTTCTTCTCCTTTTCCCTTTCACTATTCATCACTCACAATTATCAATAGTTATTACTA ATCATCTTAGCTTAAATCAAATCCCAATTTTTTCTTATTTTGAATGTGTTTATGCCTCTCTTTTCATCATCTACTTATAAAGCTTGAATCTTTGTGAAGT TTTTTATATTGGGTACTCATAATTTGTGTTTTTAAAATAAATAAATAAACATGTCTCTGTTCCTGAAAGCGTTGCCTTTGATGGCACTACGCCCCAGACC ATGTTTGTTATTTCTGTGCAGAGTTTCCAACACTGTTATTCCAAGAGAATTTTCCAGAACTAGAACTTTGTCTAGTGTTTCTGCTTCAATACAACAACCT CCTTCTGAAACACTCACTAAATCCAATGCTAAAATTTCTCACCCTTTACCCTTTAAGGACTCTCTTGAATGGGTTTCTAGGACTGATTTTTGTGGTGAGT TGAGTTTGGACGATGTTGGTAAAAGGGTCATGATTTGTGGGTGGGTTGCACTTCATAGAGTTCATGGTGGTCTCACTTTTGTTAATCTTAGAGACCAAAC TGGGATTGTTCAGGTTACGACCCTTCCAGACAAATTTCCAGATGCTCACTCTGCTATAAACGACCTGAGACTTGAGTATGTGGTTGCCATTGAAGGCACT GTTAGGTCCCGGCCAAATGAGTCAATCAACAAGAAAATGAAAACTGGATTAATAGAGGTTGCTGCAAATAGTGTTCAAGTACTTAATGCTGTAAATTCAA AGCTACCATTCTTAGTTACTACAGCAGATGACGCAAAAGATTCTCTTAAAGAGGAAATCCGTTTGAGGTATCGATGTCTTGATCTAAGGAGGCATCAAAT GAGTTCCAACATATTGCTGCGGCATAAAGTGATTAAACTCATTCGAAGATATCTAGAAGACATACACAGATTTGTGGAGATTGAAACTCCAATACTTTCT AGATCCACACCAGAAGGTGCACGGGATTATTTAGTTCCATCAAGAATCCAGACAGGGACGTTCTATGCCTTGCCACAAAGTCCACAGCTATTTAAGCAAA TGTTAATGGTAGCTGGTTTTGATAAATATTATCAGGTAGCAAGATGTTTCCGTGATGAAGATTTAAGAGCTGATAGACAACCTGAGTTCACCCAATTAGA TATGGAGTTGGCTTTTACTCCTTTAGAAGATATGTTGACCCTTAATGAAGAATTGATCAGAAAGGTTTTTCTTGATATTAAAGGTGTGGAGTTACCAAAC CCTTTCCCGAGGCTGACATACGCTGAAGCAATGGCTAGATATGGTTCAGACAGGCCAGACACCCGATTTGATCTTGAGTTAAAAGATGTATCCGACATTT TCTCAGGGTCTTCCTTCAGGGTTTTGTCTGATTCCTTGGAGAGTGGGGGAGTTATTAAAGTTTTGTCTATACCTTCTGGTGCAAAAAGATACTCAAATTC AGCTCTTAAGAAAGGTGATATTTATAGTGAAGCACTCAAATCTGGTGCAAGGGGTTTGCCTTTTATCAAGGTCTTGGATAATGGGGAGATTGAGGGGATT TCGGCATTAGTATCGAGTATGGATTCTACAACAAGGGAGAATTTGTTACAGCGATGCTCTGCAGGGCCTGGTGATCTCATTCTATTTGCAGTGGGTCCTC ATGCATCTGTAAATAAAACTCTAGACCGACTTAGAACTCGCGTGGCCCATGACCTAGATTTGATTGACCATGGCAAGCATTCAATTTTGTGGATCACTGA TTTTCCAATGTTCGAGTGGAATGATTCAGAGCAGAGGTTTGAGGCTCTGCATCATCCTTTCACTGCACCAAATCCCGAAGACATGAGTGACCTTGCATCT GCTCGTGCATTGGCTTATGACATGGTTTACAATGGAGTAGAGATTGGTGGGGGAAGCTTGAGAATTTATAAGCGCGACATACAGCAAAAGGTTCTTGAGA TTGTTGGCATCTCAATAGAGCAGGCCGAAGCCAAGTTTGGTTACCTTCTTGAAGCACTTGACATGGGGGCTCCACCACATGGAGGCATAGCTTATGGTTT AGACAGATTGGTGATGATGTTGGTTGGTGCTAATTCCATAAGGGATGTGATTGCATTCCCAAAAACAACTACTGCACAGTGTGCCCTCACAAGGTCACCA TCTGAGGTGGATCCCCAACAGCTTAAAGATCTTTCAATAACTATTTAGATATATACACACCCCATTTTTGCATTATCCTAAGGAACACTTGATTTGTATG TTTTATTAAAAAAATAATTATAACATTATTGATGTATATCAAGTGGAGTTTTAATTTATATGTATTTTTTATGGAGGGGTTCCAGTTGTGGATTGTATCA TTGGACTTGTACTTGTTCATGTTCTTGGTGGTGTATTCTAGCCAAAAATAGTTATGCCGATTAATTTATTTGAATTCTCAAGAGGTAAGCTTGGC
• Tissue: pods
• Gene name: LI_gene_169650;
• Additional information: details;

Expression of Ll_transcript_355205

FPKM

• PAB: 12.4
• PNAB: 9.3
• PS1: 5.7
• PS2: 4.2
• PS3: 5.7
• PW1: 6.5
• PW2: 7
• PW3: 6.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_355205

• Blastp: Aspartate--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 81.08% of identity
• Blastx: Aspartate--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 81.08% of identity
• Eggnog: aspartyl-trna synthetase(COG0173)
• Kegg: Link to kegg annotations (AT4G33760)
• CantataDB: Link to cantataDB annotations (CNT0000141)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020220208.1)
• Pfam: OB-fold nucleic acid binding domain (PF01336.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;