| Id Trinity | TRINITY_DN49476_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_355208 |
| Sequence | TGATTCAGAGCAGAGGTTTGAGGTCCGTTCTGCTTTTAATAACTTCGACTTCAGCTATGTATTTCTCAATATAATAAGTAATAACATATCTAGTTTTGAA TTTCCGTGCTTGTTCATTGTCATTACAGTTATCTTTCCTGTTCCTCTATCATTTTCGTTAAATTTCTGTCATTGTATGAATCGGCAATTTTCTCCATTCT CTGTTCTTCATTCTGTGGTCATCTTCGTATTATTGTTTAAATTATTGTCTAGTGCAGGCTCTGCATCATCCTTTCACTGCACCAAATCCCGAAGACATGA GTGACCTTGCATCTGCTCGTGCATTGGCTTATGACATGGTTTACAATGGAGTAGAGATTGGTGGGGGAAGCTTGAGAATTTATAAGCGCGACATACAGCA AAAGGTTCTTGAGATTGTTGGCATCTCAATAGAGCAGGCCGAAGCCAAGTTTGGTTACCTTCTTGAAGCACTTGACATGGGGGCTCCACCACATGGAGGC ATAGCTTATGGTTTAGACAGATTGGTGATGATGTTGGTTGGTGCTAATTCCATAAGGGATGTGATTGCATTCCCAAAAACAACTACTGCACAGTGTGCCC TCACAAGGTCACCATCTGAGGTGGATCCCCAACAGCTTAAAGATCTTTCAATAACTATTTAGATATATACACACCCCATTTTTGCATTATCCTAAGGAAC ACTTGATTTGTATGTTTTATTAAAAAAATAATTATAACATTATTGATGTATATCAAGTGGAGTTTTAATTTATATGTATTTTTTATGGAGGGGTTCCAGT TGTGGATTGTATCATTGGACTTGTACTTGTTCATGTTCTTGGTGGTGTATTCTAGCCAAAAATAGTTATGCCGATTAATTTATTTGAATTCTCAAGAGGT AAGCTTGGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_169650; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_355208
| Blastp | Aspartate--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 88.24% of identity |
|---|---|
| Blastx | Aspartate--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 77.71% of identity |
| Eggnog | aspartyl-trna synthetase(COG0173) |
| Kegg | Link to kegg annotations (AT4G33760) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020220489.1) |
| Pfam | tRNA synthetases class II (D, K and N) (PF00152.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |