| Id Trinity | TRINITY_DN49478_c0_g2_i13 |
|---|---|
| Name Transcript | Ll_transcript_353360 |
| Sequence | TGTCACACCACTAGCTAGCACCATCAAGGTTTTCATTTTGTTATCATCAACAACAGCTAACAATCCAAAACATAAAAAAGTGCTTATTCTGAAAATCACG CTTTCTCATATTTTCGCTCTCAAAATTTATTGGTATTGGAACAAATAATTGTGGGGTACTTGCAAGTTTCAAACTTTTGGGTCTCTGAATTTATTTATTT ATTTAATTTAATTTCCCCAATTATTGGAGTGTTTATTAGAACTCATGAGCTTGGATACCATAAAAATGGCAACTTATATGTCAACAAGTTTTGCGCCTTC AAATGCTAGAAATTCAGCTGGGGTACTGGCTGTTCCCGGAGGAAGAACACTGTCAGGGAACCAAAATGGGAGATCGTGTTTCATGAAAATGTATGAAAAA AAGTACGGTAACCGAAAATCAGGTTTGTTTCAAGTTAAATGCTCGGACAATTCCCGCAGTATTTATCGTAGTAAAGACTCTTTTCTAGAACTACATCCCG AGGTGTCTATGCTTAGAGGAGAACGTAGCAGGGAAGTGAACAATCCGAGAAATGATATCCCTGGTGGAAATGTTGCTGAAGACTTAGAATCAACATCTAG TTCTAGTAATTACAATGAGGCAAAGATTAAAGTCATTGGTGTTGGTGGTGGTGGCTCAAATGCAGTCAATCGCATGATTGAGAGTTCGATGAGTGGTGTG GAGTTCTGGATTGTTAACACTGATGTTCAAGCCATGAGAATGTCGCCTGTCTTTTCTGATAACCGTTTGCAAATTGGTCAAGAACTTACCCGAGGTCTTG GCGCTGGTGGTAATCCTGAGATTGGCATGAATGCTGCCCAGGAAAGCAAAGAATCAATAGCGGAGGCAGTTTATGGAGCTGATATGGTCTTTGTTACGGC TGGAATGGGTGGAGGAACTGGAACTGGTGGAGCTCCAGTTATTGCTGGTGTCGCGAAGTCAATGGGTATACTGACTGTCGGTATTGTCACAACCCCTTTC ACATTCGAAGGACGGAGAAGGGCAGTTCAAGCACAAGAGGGAATTGCAGCTTTAAGAGATAGTGTTGATACACTGATAGTTATTCCAAATGACAAGCTGC TGACTGCAGTTTCTCCATCTACTCCAGTAACTGAAGCATTCAATCTGGCTGATGATATTCTCCGACAAGGTGTTCGTGGCATATCTGATATCATTACGAT ACCAGGATTGGTGAATGTAGACTTTGCTGATGTTCGAGCTATAATGGCCAACGCAGGTTCTTCACTTATGGGGATAGGAACTGCAACTGGGAAAACAAGG GCAAGAGATGCTGCATTGAATGCCATTCAGTCGCCTTTATTAGATATTGGTATAGAGAGAGCTACTGGAATTGTATGGAACATAACTGGTGGAAGTGATC TGACCTTGTTTGAGGTAAATGCTGCAGCAGAGGTTATATATGACCTTGTAGACCCTACTGCTAATTTAATATTTGGATCAGTAATAGATCCATCACTAAG TGGTCAAGTAAGCATAACATTAATTGCAACTGGATTCAAGCGTCAAGAGGAAAATGAAGGGAGACCTACACAGGCCACCCAACTCACACAGGGAGAACCC ATCGGTTTCAATCGGCGATCTTCCTCTTTCACCGATGGCAGTTTTGTCGAGATCCCTGAATTCCTGAAGAAGAAAGGGCGTTCACGCTATCCAAGAGCTT AGTACTGTCCCAGATTCTTAATACCAAGAAAGGATGCTCCTTGCACTTTTAGGGATGCAGTTAACATTGGTCTAGGTATTAAGTCTTCATTTCAAACCTT TGTTAGCAATTTTAGGTCTTGTTGTGCATACTTATACATGAAAGCTTAGTACTTTCCAAACTTTTATGTTCAAAGTTGAGCCTGGTTCGGGATAAAGCAT CAATAAGAATAAACTCAATACAGCGGAAATGAAAATATACCGTTATAGAAAAGAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_169666; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_353360
| Blastp | Cell division protein FtsZ homolog 2-1, chloroplastic from Arabidopsis with 75.57% of identity |
|---|---|
| Blastx | Cell division protein FtsZ homolog 2-1, chloroplastic from Arabidopsis with 75.57% of identity |
| Eggnog | Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity (By similarity)(COG0206) |
| Kegg | Link to kegg annotations (AT2G36250) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425683.1) |
| Pfam | Tubulin/FtsZ family, GTPase domain (PF00091.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |