Ll_transcript_353107

• Id Trinity: TRINITY_DN49479_c3_g2_i3
• Name Transcript: Ll_transcript_353107
• Sequence: TACAGTTTCGATTTGTCAGAGACACTAAACAGACACTGTTACAGAAGCGAACAAGTAACAATAGCTTTGCGTTGCGAACTCCAAAACGGCGTCGCTTTAT GGCCGATGAAAAATCCCAAATCATAATGGCTACTAGAGACAGAGATCGAGAGCTTCTCGTCCCCGTCGCTGATTCCGCCGGCGACGGTAGCGCCACCTTC TCTAAGTCCTCGTCTTCTTCGTCTCTTTCTCATCATTCTGGCAACGAGGTGATTGATCTCTTGCTTCAACTGAATTAGGGTTTTGATTGAGTCATGAAAT CCAATTTTCATAAATCTATTTTGTGTTTTTTTCTTCAATTTGATTAATCTGGATGGATCAATGAGTGATTTTTTTTTCTTTTGATTTCACAGCATGCTTG AGCTAATGCTATGTTTTTAGTACCAACAAATTGGTTTGCAAAATAGTGAGCAATGCTTCAGTTCTGTATAGTGAAGGATTTTAAGTACATAACCGTTTCG GCTAGTATACATGATGTATGAAATTGATTGATGCCACAATTAGAAACAGAGTGAAGCACTGTGGTGCTAGCAATAAGGTTTATAATGGGGCAGTCATGAC TTGCATTCATATATATTGGAAGTGAATGCACTTTTTATTTTTGGATGATTTTGCATGCTGAAGAAGGTTTACCTCATTCTTTTAGTTACATATGATGATT ATCTCTGCCTTGTAAGTATTTGTCTGCCAGATTATTATTTCTCGTTTCTGCCAATTTTGTAGACTTTTATCAAAGTTGTTAGGAGCTGGGCATCAAAGAA GTTTATGACCGGATGTGTTATTCTCTTTCCAATCGCAATCACCTTCTATATAACATGGTGGTTCATTCATTTCGTGGATGGATTCTTTTCCCCTATCTAT GCTCAACTCGGAATTGAAGTTTTTGGGCTTGGATTCGTAACTTCCATAACTTTCATCTTCGTGGTTGGGGTTTTCATGTCATCGTGGTTGGGTGCCTCTG TCCTGGGCCTTGGGGAGTGGTTTATCAAGCGAATGCCACTTGTTCGCCATATTTATAATGCCTCCAAGCAGATTAGTGCTGCTATCTCACCAGATCAAAA TACACATGCCTTTAAAGAAGTAGCCATCATTCAGCATCCACGTATTGGTGAATATGCATTTGGATTCATCACCTCATCTGTTGTCCTTCAGAACCATTCT GGGGGTGAGGAGCTATGCTGTGTCTATGTTCCAACCAACCATCTTTATATCGGTGATATATTTCTTGTCAGCACCAAGGATGTCATTAGGCCTAACTTAT CAGTCCGTGAAGGAATTGAAATTGTTGTTTCTGGAGGCATGTCGATGCCACAAACCCTACAAACAATTGAATCACGCGTTACGCCAGGGGATATCAGCAG ACGGACCAGAAGCTGAGAGAGTGAAGGGCTATAGCAGTTGTTCTTGCTATATACCTTGCATCATATGGAGCTGTCAGAATGAAAATGCAATCATTTGTGT TGAGAATGCAAGTAATGAATGTACATTTTGGTTGCTGGGAAAGTTAGATTCTGATGGCACGTGTAACATTGGTTTATGTGTAATATAAGGTAGAATTTAG CATTCTTTTGGAAATATAGTTTGGGTGATGACAAGCATTCAAAATTCTTTTTATCTGCTGGAGTTTCAATTATTTTACCTTTGGTAATGTAGTGATTCCC CCACTTATTATATAGCAATTCAATTTTATTGTTCCCCACTAGTTGCCAATTGATTAGTGTTTGCATCATTGTATGTGGTTATGATTAAGTGCTAACTCAG ATCTTAAGAAAATATTGAATGTCTTTTATGTTCTTC
• Tissue: pods
• Gene name: LI_gene_169675;
• Additional information: details;

Expression of Ll_transcript_353107

FPKM

• PAB: 0.1
• PNAB: 1.4
• PS1: 0.1
• PS2: 0
• PS3: 0
• PW1: 0.2
• PW2: 0
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_353107

• Blastp: Protein CONTINUOUS VASCULAR RING 1 from Arabidopsis with 84.18% of identity
• Blastx: Protein CONTINUOUS VASCULAR RING 1 from Arabidopsis with 83.9% of identity
• Eggnog: conserved protein(COG2928)
• Kegg: Link to kegg annotations (AT2G20120)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448387.1)
• Pfam: Protein of unknown function (DUF502) (PF04367.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;