Ll_transcript_354997

• Id Trinity: TRINITY_DN49487_c3_g3_i3
• Name Transcript: Ll_transcript_354997
• Sequence: CATGATCGGAATGGAATCTTCTGGCATCCACGAAACCACATATAACTCGATCATGAAGTGTGATGTGGATATTAGGAAAGACTTGTATGGAAACATTGTT CTCAGTGGTGGTTCTACCATGTTCCCTGGTATTGCTGACAGAATGAGCAAGGAAATCTCCGCATTGGCCCCAAGCAGCATGAAGATTAAGGTGGTTGCCC CACCCGAGAGAAAGTACAGTGTCTGGATTGGTGGCTCCATCTTGGCTTCTCTCAGCACTTTCCAACAGATGTGGATTGCAAAGGCTGAGTATGATGAAGC TGGTCCTTCAATTGTACACAGGAAATGCTTCTAAATGATGCAGAGTGGCTTGGTGAATGAAAATACGATTGTCCTTGTTTTCTGTTTGAAAATGTTTGTT GTTAAAACAGTTAACTAGGAGAAAATGATGGCAGGGTTAATTCTTTCATTTCATTTGTTTTATTACGTTGATCTTTTAGTTAAAAGATCAACCTTCATTC AGTTCATTATACTTGTTGCTTCCCCATATTCTTATAAATAAGATGGAATTGGATCGCTGCATATATTATCATCACTGATTCAACATCAAAATTTATTTAA TTATAAAG
• Tissue: pods
• Gene name: LI_gene_169744;
• Additional information: details;

Expression of Ll_transcript_354997

FPKM

• PAB: 7.5
• PNAB: 3.7
• PS1: 1.3
• PS2: 1.1
• PS3: 1.7
• PW1: 0.4
• PW2: 1
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_354997

• Blastp: Actin from Pinus with 93.64% of identity
• Blastx: Actin from Pinus with 93.64% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: gga-mir-3533 (MI0015386)
• Ncbi protein: Link to NCBI protein (XP_003539675.1)
• Pfam: Actin (PF00022.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;