| Id Trinity | TRINITY_DN49491_c1_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_354237 |
| Sequence | CAACGTTATATATGTCTGCTTCATGACAAACTGTGAAACGGCGTCGTTGCAAGTACGTCACTTCACAATGAAGAACAACCCTCCTTCTCTAATTTCTCTC TCTATCAATGCACTCTCTCACCAACTTCTCCATAGAAATGATGAAGTTTATGATGATATTTATGATCTTCCTTCTCATTTACTTGATACCTTAATTACCT CTTTGCCCCCACTCTCTTTGCGCAATTTCCATCATAACCTGCCATTCGAGGATCGCAATGCTGAGGATTTTTCTCATGATAACTTAACAAATAAGCGAAA ACGCGGCAGGGATTGGAATCTAAATACAGCTTGGCAGAGGTTGTTTAAGTTACGGTGGCCCGATCTCATCGACAAGATTCAACCAACAGATTGGCAACAA GCATATTGGGAAACCCATTTGCAAAATTGTTTCGATGAGGCGGCAGAGATAGCACTAGTCCCATCTTTTAATGGATATATTAGTGACATACAGATGTCAG GTACTATGATAATTTTCTTTCTTACTTTTACGAAAATTTCTACGGGAAGTTGCCTTCTACTACTAGATTCTGTAAAAGTTTGTTCACTTTTAAAAGTGGA TATGGAATGATTCAATTAGTTAATTTTGCTCTTCAAATGATAATATTGCTGCAGTTCTTTGTGTTTATGATGAAATGTGATTGTAACATTTGATGATGTA AGTACAATACTGGCATTGCTCGAGACTTTGGCACATCGAAGGCTGTGTAAGATGCCTTTGACTGGTGGCAGAGAATGAATGAGTAACATGGATTCGTCCT TTACGTAAAAACCTTCGAAGCACCAATTCGACGATTTCATTATTTTTTATCTCTTATAAACCAAGTTTCGAAGATTTTGCTTTCGCGTTAACCATATTCA CTGCATCTGTATAGTTAAGGTGCCCCTGCCTTGTGCACTGTCTCATCTTTTGGGTGCACAACCCCTTCAGCCCCTGTTTCTATCCATTTAGTTTGTCACT GATAATTTATTGAATTTTCTTCACTTTACCCTTTTCCGATTCAGATAGCATATTGAGTTATATTGGTTTTACGGGACATACAGATCATTCAACTTGCGAC CATTCAAAACTTTTGTACCATTGCCAACAATTTGGCAGCCATGCAAGGTAAGATGTTATTGTTATCGTGCGTCATAATATATATCGACATGATCAGTTAG GATTACCTTTTAATATGAAAGAAAGGATTAAGCAATGAATTTCATTTGTGTTCATGAATAAAAAAACTTCCTTTTGTTACTGTTAGTGAAGATCAATGGT TGAATAGTTAACGCAATCTTGCTTTGTTTATTAGTTTCGGATCCAGCTGACCAGTTAAGCTGTGTTGTCATAGTTTAAAGTTTAATGGCGGCCGTTCCCG TCACGATAATTCATTATCGTTAAGTTTATAAATTATATCTGTGCTGTTAAATACGTTATGCATCACTTCTTTTTTGCCTTGACCAATTCTTTCACCTATC ACTTCGTCTCGATGCAGCTGTCTGAGACTGCAAAATGTTTTATGTGCTGCAGAAACTAGTGTAAGTTGTGCTTTCCTTGATTAATCCGAGTCTATTCGGC ATTTATTCTTTTGGAATTATAATCATAATATTGCTTTTACAAGCTTATGGAAAGCATTGGCCACACATGTATATGTATTCTATACAAACACTCTAAGATG TTATGAAATATACAATTTTTGTAGTTTGTTTATTCATGAGGATTTTAATTTTTATTCTCGTTTCTAAAAGCATTTTTGAACATTTAGTGTGTGATATTTT AATACTTCAATTATATAAATTTGATTTTTCCTCTTGCTATTGCCATTTTTTGGTTAATTTCTTATCGACATTCCTACAGTGCTGCAAACTAAATTTATGA GAGTGATGTCCAAAATGTAATTTGAATGTGGAGGTTTAATGTTTATAACCGATTACGAAATTCAATAAGAGGAAGAGAAACAATCTTTTTTACCTCCAGA AATTAGAAACTATATGTGTTGTCCACAAGATATTGCATCTTTATAGTTTACCGTTCAAGACATGTACCTTGTGATGTTTTCCTAAATTTCAACTCATATT TTAAAACCATGAAACATGTTATGCTGTCAAATACTCTGACCTGTAGGACCTGTTAAGGGAGTGCAAGCTGCAGAGTTTGGTGCTAAGTTGGGTCAGATCC AAGGAACAAATTGATGGATTATGCAAACTTCTCACTCAACATAGTGAAACATTAACATCACTGAAGTTTATTCACTGCACAGTCTCCAAAGATTTTATCG ATGCCATATGTGGTTCTGTAGTCATAAATAGTGTACATCGACATGGGATACAACACTTCTCGATCATTCTCTCAAGTTTTCTCGACCCATGCACATTTTC TTTACCTACTGAATTTGTGTCATTTTTGTCTTCAGGAAGGTCTTTGTGCTCATTAAAATTCTCTAACAACAACCATGGATGGAATTTTGCTAAAGCTCTT TTTGCGACTCTTCTCAATATTTCGTCTAGCATAACAATCCTTGACCTATCTGAGAATGAAATAGCAGGATGGCTTAAAGATTTCAACAAGAGATTTTCTA CTGGTCCACCTATGTCTTTTGGAATTGGAAAGTCCTTGCAACTGCTGCGCGTACTCAACCTGAGGGGAAACTATCTACGAGAAGATGATGCCGAAAGTCT TGTGTATGCTATGGCACACATGCCAATCTTGGAGGACCTGGATATAAGTGACAATTTCATCGGGGATGAAGGAATCCGCAATTTAATTCCATTATTTGAT GGAACATCTGGAATGTGTTCACATTTGGTTTGTTTGAAAGTAGAGACTTGTGAGTTGTCATATGTCGGAGTTGGTCACCTATTAGATGCTCTTTCTAACT TCAAAGGACCATTGAAGTCTCTTTCCGTCGCCGACAATTACCTCGGCAGTCAAGTAGCTGAAGCTTTGGCAAAATTTTTGAGCACACCTATCGAAGTACT TGATATCGCAGGCATCGGATTGGGTTCGTCGGGTTTTCAAGAGCTTCAAAATGTAGTGAAAGATGATCTTAAACTGGTGAAAATTGACATGAGCAAAAAC CGCGGTGGGATCGAAACTGCCAAGTTTTTGTCGACGCTCTTGCCGAAAGCTCCGCAACTAGTTGATGTGAATGCAGCCAGTAATCTTATGCCAATAGAAT CATTGGACATAATCAGTTGTGCATTAAAACTTGCAAAAGGTAATGTTGAGCATTTGGACTTGAGTGGACACACATGGAACTATAAGCCTGAACATGCTTC TCTACACACTGAATTTGTCAATGATGGAAAACCTATACTCATTCTTCCATCACCATCACTTTTTGCTGCACCTTATGATGATGATCCTTAGAATCCAAGT TTCATGTGGTTCCAATTTGTGTTGAATAGCATAAGCTTTTAGTGGTGTATTTTTTTGTTTCATTATTATCATGAATGTTAGCTCAATTCAATGCATAATG GTTCACTATACAACAAAGTTTGAGGTCAATTTTGTTTAATCTTTTGTACATTTTGTAACTTCTGTTTAATTATGAAGTTGGTTTAGTGGTGTAAGGCTCC AATGGATTTATAGATCGGCCAAAATGTCAGAGATTTGATTCGTAGATGATACTTGTTAGGAGGAACAGTCATACATCTGAAAGAGATTATTCAGTCATAC ATCTGAAAGAGATTATTCATAAGGTGAAGGTATATTATTGATTCTACCAAAAAAAAATTATAAAGTTGGTCTTACGACCTAGTTTTCTTTTTCGACTTTT ATCATTTTTTGGTCTTCATTAAATTATATGCAATGAGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_169778; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_354237
| Blastp | Tonsoku-like protein from Mus with 27.53% of identity |
|---|---|
| Blastx | NLR family CARD domain-containing protein 3 from Homo with 24.15% of identity |
| Eggnog | Ankyrin Repeat(COG0666) |
| Kegg | Link to kegg annotations (72749) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456999.1) |
| Pfam | Leucine Rich repeat (PF13516.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |