Id Trinity | TRINITY_DN49491_c1_g1_i12 |
---|---|
Name Transcript | Ll_transcript_354239 |
Sequence | CAACGTTATATATGTCTGCTTCATGACAAACTGTGAAACGGCGTCGTTGCAAGTACGTCACTTCACAATGAAGAACAACCCTCCTTCTCTAATTTCTCTC TCTATCAATGCACTCTCTCACCAACTTCTCCATAGTAACAAATTTTCCCCCTTTCTCATTTCTTCTTCTTCATTTCATTTATTTATTAATTTATTTATTT ATTCTCATAAAATGGTTTCATTGCAGGAAATGATGAAGTTTATGATGATATTTATGATCTTCCTTCTCATTTACTTGATACCTTAATTACCTCTTTGCCC CCACTCTCTTTGCGCAATTTCCATCATAACCTGCCATTCGAGGATCGCAATGCTGAGGATTTTTCTCATGATAACTTAACAAATAAGCGAAAACGCGGCA GGGATTGGAATCTAAATACAGCTTGGCAGAGGTTGTTTAAGTTACGGTGGCCCGATCTCATCGACAAGATTCAACCAACAGATTGGCAACAAGCATATTG GGAAACCCATTTGCAAAATTGTTTCGATGAGGCGGCAGAGATAGCACTAGTCCCATCTTTTAATGGATATATTAGTGACATACAGATGTCAGGTACTATG ATAATTTTCTTTCTTACTTTTACGAAAATTTCTACGGGAAGTTGCCTTCTACTACTAGATTCTGTAAAAGTTTGTTCACTTTTAAAAGTGGATATGGAAT GATTCAATTAGTTAATTTTGCTCTTCAAATGATAATATTGCTGCAGTTCTTTGTGTTTATGATGAAATGTGATTGTAACATTTGATGATGTAAGTACAAT ACTGGCATTGCTCGAGACTTTGGCACATCGAAGGCTGTGTAAGATGCCTTTGACTGGTGGCAGAGAATGAATGAGTAACATGGATTCGTCCTTTACGTAA AAACCTTCGAAGCACCAATTCGACGATTTCATTATTTTTTATCTCTTATAAACCAAGTTTCGAAGATTTTGCTTTCGCGTTAACCATATTCACTGCATCT GTATAGTTAAGGTGCCCCTGCCTTGTGCACTGTCTCATCTTTTGGGTGCACAACCCCTTCAGCCCCTGTTTCTATCCATTTAGTTTGTCACTGATAATTT ATTGAATTTTCTTCACTTTACCCTTTTCCGATTCAGATAGCATATTGAGTTATATTGGTTTTACGGGACATACAGATCATTCAACTTGCGACCATTCAAA ACTTTTGTACCATTGCCAACAATTTGGCAGCCATGCAAGGTAAGATGTTATTGTTATCGTGCGTCATAATATATATCGACATGATCAGTTAGGATTACCT TTTAATATGAAAGAAAGGATTAAGCAATGAATTTCATTTGTGTTCATGAATAAAAAAACTTCCTTTTGTTACTGTTAGTGAAGATCAATGGTTGAATAGT TAACGCAATCTTGCTTTGTTTATTAGTTTCGGATCCAGCTGACCAGTTAAGCTGTGTTGTCATAGTTTAAAGTTTAATGGCGGCCGTTCCCGTCACGATA ATTCATTATCGTTAAGTTTATAAATTATATCTGTGCTGTTAAATACGTTATGCATCACTTCTTTTTTGCCTTGACCAATTCTTTCACCTATCACTTCGTC TCGATGCAGCTGTCTGAGACTGCAAAATGTTTTATGTGCTGCAGAAACTAGTGTAAGTTGTGCTTTCCTTGATTAATCCGAGTCTATTCGGCATTTATTC TTTTGGAATTATAATCATAATATTGCTTTTACAAGCTTATGGAAAGCATTGGCCACACATGTATATGTATTCTATACAAACACTCTAAGATGTTATGAAA TATACAATTTTTGTAGTTTGTTTATTCATGAGGATTTTAATTTTTATTCTCGTTTCTAAAAGCATTTTTGAACATTTAGTGTGTGATATTTTAATACTTC AATTATATAAATTTGATTTTTCCTCTTGCTATTGCCATTTTTTGGTTAATTTCTTATCGACATTCCTACAGTGCTGCAAACTAAATTTATGAGAGTGATG TCCAAAATGTAATTTGAATGTGGAGGTTTAATGTTTATAACCGATTACGAAATTCAATAAGAGGAAGAGAAACAATCTTTTTTACCTCCAGAAATTAGAA ACTATATGTGTTGTCCACAAGATATTGCATCTTTATAGTTTACCGTTCAAGACATGTACCTTGTGATGTTTTCCTAAATTTCAACTCATATTTTAAAACC ATGAAACATGTTATGCTGTCAAATACTCTGACCTGTAGGACCTGTTAAGGGAGTGCAAGCTGCAGAGTTTGGTGCTAAGTTGGGTCAGATCCAAGGAACA AATTGATGGATTATGCAAACTTCTCACTCAACATAGTGAAACATTAACATCACTGAAGTTTATTCACTGCACAGTCTCCAAAGATTTTATCGATGCCATA TGTGGTTCTGTAGTCATAAATAGTGTACATCGACATGGGATACAACACTTCTCGATCATTCTCTCAAGTTTTCTCGACCCATGCACATTTTCTTTACCTA CTGAATTTGTGTCATTTTTGTCTTCAGGAAGGTCTTTGTGCTCATTAAAATTCTCTAACAACAACCATGGATGGAATTTTGCTAAAGCTCTTTTTGCGAC TCTTCTCAATATTTCGTCTAGCATAACAATCCTTGACCTATCTGAGAATGAAATAGCAGGATGGCTTAAAGATTTCAACAAGAGATTTTCTACTGGTCCA CCTATGTCTTTTGGAATTGGAAAGTCCTTGCAACTGCTGCGCGTACTCAACCTGAGGGGAAACTATCTACGAGAAGATGATGCCGAAAGTCTTGTGTATG CTATGGCACACATGCCAATCTTGGAGGACCTGGATATAAGTGACAATTTCATCGGGGATGAAGGAATCCGCAATTTAATTCCATTATTTGATGGAACATC TGGAATGTGTTCACATTTGGTTTGTTTGAAAGTAGAGACTTGTGAGTTGTCATATGTCGGAGTTGGTCACCTATTAGATGCTCTTTCTAACTTCAAAGGA CCATTGAAGTCTCTTTCCGTCGCCGACAATTACCTCGGCAGTCAAGTAGCTGAAGCTTTGGCAAAATTTTTGAGCACACCTATCGAAGTACTTGATATCG CAGGCATCGGATTGGGTTCGTCGGGTTTTCAAGAGCTTCAAAATGTAGTGAAAGATGATCTTAAACTGGTGAAAATTGACATGAGCAAAAACCGCGGTGG GATCGAAACTGCCAAGTTTTTGTCGACGCTCTTGCCGAAAGCTCCGCAACTAGTTGATGTGAATGCAGCCAGTAATCTTATGCCAATAGAATCATTGGAC ATAATCAGTTGTGCATTAAAACTTGCAAAAGGTAATGTTGAGCATTTGGACTTGAGTGGACACACATGGAACTATAAGCCTGAACATGCTTCTCTACACA CTGAATTTGTCAATGATGGAAAACCTATACTCATTCTTCCATCACCATCACTTTTTGCTGCACCTTATGATGATGATCCTTAGAATCCAAGTTTCATGTG GTTCCAATTTGTGTTGAATAGCATAAGCTTTTAGTGGTGTATTTTTTTGTTTCATTATTATCATGAATGTTAGCTCAATTCAATGCATAATGGTTCACTA TACAACAAAGTTTGAGGTCAATTTTGTTTAATCTTTTGTACATTTTGTAACTTCTGTTTAATTATGAAGTTGGTTTAGTGGTGTAAGGCTCCAATGGATT TATAGATCGGCCAAAATGTCAGAGATTTGATTCGTAGATGATACTTGTTAGGAGGAACAGTCATACATCTGAAAGAGATTATTCAGTCATACATCTGAAA GAGATTATTCATAAGGTGAAGGTATATTATTGATTCTACCAAAAAAAAATTATAAAGTTGGTCTTACGACCTAGTTTTCTTTTTCGACTTTTATCATTTT TTGGTCTTCATTAAATTATATGCAATGAGAC BLAST |
Tissue | pods |
Gene name | LI_gene_169778; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_354239
Blastp | Tonsoku-like protein from Mus with 27.53% of identity |
---|---|
Blastx | NLR family CARD domain-containing protein 3 from Homo with 24.15% of identity |
Eggnog | Ankyrin Repeat(COG0666) |
Kegg | Link to kegg annotations (72749) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456999.1) |
Pfam | Leucine Rich repeat (PF13516.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |