| Id Trinity | TRINITY_DN49500_c4_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_405077 |
| Sequence | GTTTTTATATATTTTTTTAAGAAAAATAAAAAATAAAATTATTAAACACCATTTTTACGCCAAATTATTTTTAAAACAGATTATTTTTTCAAAACTGAAA GCCAAAAAATTATTCTGGGGGATAAATTGATAAATTTGCACCTTGGTTCGGTACCTGACCTATAGGTACCAAAGCGGGTTAGGGTTTTCGCTAATCCAAT TCCATCGATGGCGAATCGTACGGATCCATCAGCGAAGAGCATAAGAGGGACGAACCCTCAGAACCTTGTTGAGAAAATTCTCCGATCCAAGATCTATCAG AGTACCTATTGGAAGGAACAATGTTTCGGTTTAACGGCAGAAACCTTGGTCGACAAGGCCATGGAGGTCGAACACCTCGGCGGAACCTACGGCGGAAACC GCAAACCCACACCGTTCATGTGCCTTGTCATGAAAATGCTACAGATTCAGCCTGAGAAGGAAATCGTCATCGAGTTCATCAAAAACGAGGATTACAAATA TGTGAGGATACTTGGTGCTTTTTATCTGCGTCTTACTGGTTCAGATATTGATATATACCGCTATCTTGAGCCCTTATACAATGATTATCGGAAACTGCGG CAGAAGTTAGCCGATGGACAGTTTGCATTGACACACGTGGACGAGGTCATTGATGAACTTCTCACTAAAGATTATTCCTGCGATATTGCTATGCCCCGCA TCAAGAAAAGGTATTGTTATATCTTTTGTTTGGCGTCTAATTTATACTTTCTGCTTTGTATGATCAATATGTCTGTAATTTATATTTTGTTCGGCGTTTA GAAAATTAAAATCAACAATACTAAAAATTAAAATTAGCAATACAGCCAATACTAACAAGTCTTATAAGGCCATGGTGCCACACTGACTAAAAATAAAAAA TTAAAGATAAAAGACGATTACTâBLAST |
| Tissue | pods |
| Gene name | LI_gene_169871; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_405077
| Blastp | Pre-mRNA-splicing factor 38 from Arabidopsis with 84.71% of identity |
|---|---|
| Blastx | Pre-mRNA-splicing factor 38 from Arabidopsis with 84.71% of identity |
| Eggnog | RNA splicing(ENOG410XQ3F) |
| Kegg | Link to kegg annotations (AT2G40650) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452266.1) |
| Pfam | PRP38 family (PF03371.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |