| Id Trinity | TRINITY_DN49500_c4_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_405082 |
| Sequence | CTTCAGCATTCAGGGCCTGTTTGTTTAGGCTTAAAATTTTCAGTTTGAGAAGCTTAAAAAAATATAGCTTCTTGAAAATGCTGAAATTTAGATTTTTCAG TTTTTTTGTAGCTTTTCAAACAAATGTATCCAAAATACTAAGTTTTTGGCAAATGGTTCTGCAAAAATGAGTTTGAGCAAACGTAATGTATCCAGAAGTT GAAAATATATCTTCTCAAAAAGAGCTGAATTTGAGTTTCTTTTGCAGCTTTCTGCATTTTTGTAATGCTCGATCAAACGAATGTGCTAGGATTGTTCGCG GTTTTTTAATCTAAATAATTAATTTTTAGGTGAATGAGATTAATCGAACATCCATTTAATATTGAATTTTTTGTCTTGTAAATTGTGCCTTGTTCTATTA TCAATCATTCACTCGTTAAGATAACTGACTGCTCTCATTGTTGCAGAGTTTTCATTGACACATGTTGATGAGGTTATTGATGAACTTCTCACTAAAGATT ATTCTTGTGATATTGCTATGCCCAGAATCAAGAAAAGGTTTTGTTCTGTTCTAATTCATATTTTATGGTTTGCATGATCAATTTCTCTATGTTTTCAGTA TTCTTTAGAAGTGGGGAACATATATTCCTTAGATGATTATTGTTTGTACTTTATATTGCTGAATTTGGAGCGTATTATCCTTTGATCCTATCCTTTGTTG TTTTCTGTTTGGTGTATTCACATCTGAAAGATATATACAGTACATGTTTACTTGTCCTTCTAAAAGCTGTTTTTTGAGGCCTTGAAAACAAATCACTTCG ATTAGTTTTTAATGTTAACAAAAATACATTTTTTCCTCAGAAGATAATTAAAAGGATCGAGTAGGGGGAGATAGTTTTAGACGGAAGTCTGTGCCTCACA CGTCACTTCATTTTCCTGCCAGATGTACTCCACCTTGTTTCTCCCGAGCATGTTGGAGTTAAAATTTTATTTGAAACTTTTAATTTATGAGCTATCTGCA TTTGAAATTGAGCTGAGAAATTGTCCTGTATTTTGCCATGCATAAAAAGTGGCCTTTATGATACCTTTTTTGTGTTATCTTCTTTGGGAAGATCTTACTT TGTGCATGAACTGCAAAGTTGATACTTCAAAACAGGTTATAAATTTGCCTTCAAAGTGAAGATGATTAAATGATAAATTGCGGTTATTGCTGGCATTTAT TTTAGGTCTTCTTTTTTTTTAGGTGGACTATTGAATCTCTCGGTGCACTAGAACCTAGGCGAAGTGCGCTTGAAGAAGATTTTGAGGAGGAAGAAGAAAA AGAAGATAATGACCAACCTGCTGATGAGCTTGAAGATAGGACCCACGAGAAGGATTACTATCGTGGGCGAAGCCCTACAAGGGAAAGAGACAGGGACAGA AGGCGTGATAGTCATAGACATAGGGACCGTGACTATGACAGAGATTATGATAGAGATTACGACAGAGAGCGTGGACGTGGCCGGGACAGAGACAGAGACA GGGAAAAGGAGAGGGACAGAGACCGATATCGTATCAGGGATGATAAAGATTATGGTCGTGATAGAGAGGGTAGGGAGAGAGAGAGGAGAGAGAGAGATCG TGATCGTGGAAGACGAAGGAGCTACTCAAGGAGTCGAAGTAGGAGTAGGGATCGCAAGGAACATGATGGTGGAGACTACAGAAAGAGGCGTGCCCGGGGC AGCATAAGTCCTAGAAGGCATGGTGATGGAGCTGAGGATGGCGAGCCAAAGAAAAAGAAGGAGAAGAAAGAAAAGAAGGAAAAGAAGGATGATGGGACTG ACCACCCTGATCCAGAGATCGCAGAAGCAAATAAGCTAAGAGCATCCCTTGGTTTGAAACCACTGAAGCTCTGATCTGAGAAGTGTGGCTTGAATTTGTA GAAGTTTGTCACATAAGTAAACTTATATGTTCTTGACCTCTGTATTATAGTTGTTGCTTTTCTTTAGTTACAAAAGCCGTGCTATCAAATTTCTATGGCT ATGTTTGCCTTTATTTTAATGAGAGCTTTTACTATATCCAGAGTGTCTGTAAACTTTCCGTGTTTGGATTATTATAACTCTTGTCCAAATTTATGGATTG AATGCTGTGAATTGGTTATTATGAATTCAGAAAATACCACTCCAATACCTGATCTATCTGTGTTGGGATAATTTTGAAGTAAACACCATACCTTGAGGTT TAGCTGCATATAGTACCTGTCTTTTTAAAATTCTGGGGTCACCGTGAGATTAAATAAGCTTTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_169871; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_405082
| Blastp | - |
|---|---|
| Blastx | Pre-mRNA-splicing factor 38 from Arabidopsis with 82.35% of identity |
| Eggnog | RNA splicing(ENOG410XQ3F) |
| Kegg | Link to kegg annotations (AT2G40650) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452266.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |