Ll_transcript_405322

• Id Trinity: TRINITY_DN49501_c0_g1_i10
• Name Transcript: Ll_transcript_405322
• Sequence: TTCAGAGATTACTCATGCCTAATCAACATCAATTATTAATATTATTTTAATTATTATTAATTTAATACTAAATCCCCTCCCCCACTCTGTATAATATAAA GTCCAAGTTCATTCCCCTTTTCTCAATCCCACTCTCATTCTCTCTCAACTCTCATCAAAATCCTATCTATACCCAAAAAAAAATTCAAAAAGCCAACATG GGTTCGACTAGATCGAACACCTTCACCATGATGCTCCTCATTTTCACGCTCTTAGCACTTTCATCAGCCATAGACATGTCCATAATCTCGTACGACAAAA CCCACATTGACAGAACCAACGATGAGGTCATGGCCTTATACGAACAGTGGCTAGTGAAGCATGGTAAACTTCACAACGCGCTTGGTGAGAAGGAAAAGCG GTTCGAGATTTTCAAAGATAATCTCCGGTTCATTGATGAACATAATAATTATGATGTGAACCGGACCTATAAGCTTGGGTTGAACCGGTTCGCTGATCTG ACCAATGAGGAGTATAAAGCCAAGTTCGTTGGAAGTAGGATTGACCCTAATAGGAGGGTGGGTAAGTTGAGGACTAGGAGCAATCGTTATGCGCCACGTG TCGGTGATAAGTTGCCTGAGTTTGTTGATTGGAGGAAGGAAGGTGCTGTTGTTGGAGTCAAAGATCAAGGAGGATGTGGGAGCTGTTGGGCATTCTCAGC AATAGCTGCAGTGGAAGGCATAAACAAGATTGTGACAGGTGATCTGATTTCACTGTCAGAACAAGAGTTGGTAGATTGTGATTCATCATACAATGAAGGA TGCAATGGTGGAATTATGGACTACGCCTTTGAGTTCATCATCAACAATGGCGGCATCGACTCCGAAGAGGATTACCCTTACAAAGCTGTTGATGGTAGAT GTGACCAAAACAGGAAAAATGCTAAAGTTGTTGCAATTGATGGCTATGAAGATGTTCCTACATATGATGAGAAGGCCTTGCAAAAAGCTGTTGCGAATCA GCCTGTGGCCGTCGCTATTGAAGGAGGTGGCAGGGAATTCCAGTTATATGAATCCGGTATATTTACTGGTAAATGTGGAACTGCATTGGACCATGGTGTT AATGCTGTTGGATATGGTACAGAAAATGGCAAAGATTACTGGATTGTGAGGAATTCATGGGGTCCTAACTGGGGAGAAAATGGCTACATCAGACTCGAAC GTAATATAGCCAGCAGCAGAGCTGGCAAGTGTGGAATTGCAATCGAGCCATCTTATCCCGTTAAGAATGGTCAAAATCCTCCAAAACCCGGACCATCACC CCCAACACCTGTGCAGCCACCATCTGTCTGTGACAACGACTACAGCTGTCCTCAGAGCACGACTTGTTGCTGTATCTTCGAGTTTGGAAACTCTTGCTTT GCATGGGGATGTTGTCCTCTTGAGGGTGCTACTTGCTGTGATGACCACTACAGTTGCTGCCCACATGAGTATCCCATATGCAACGTTAATGCCGGAACCT GTCTAAGGAGCAAGAACAACCCATTTTGGAGTGAAAGCATTGAAGCGAATTCCGGCTCTGCTCCGCACTTCAGTCGGAAGTGGGAACGAGATAAGCAGTG CTTAAGCTGTTTAAGCAAATGTGTACGTGCAGAAAGAGCAGACGATGAATTCAAGGAGGGCGAAGGACTACAACACTAGTTGATTAGTCTTTTTCTTTTT TGCTTTCATTTATACTGCACTATAGGAATAAATCTACACCATTGTGATACAGTACATGCTGTGTCAAGTTGCAGTCATACACTGACCTTGTACATAGGGT TATATTATGTGCTGTATTTGTATTCAAATTTTAAACTAGGGGCATGTTTGATTATTGTAAGTTTCAAAGTTATGTAATTATGTGATCAAGAATCACAAGA ACTTTTTCCTTCTTTATCCAAATGCAGCAAAGGTAATAAAAAGGGGTAGATGAAATGTTTAATGGTAAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_169877;
• Additional information: details;

Expression of Ll_transcript_405322

FPKM

• PAB: 12.2
• PNAB: 38.3
• PS1: 149.6
• PS2: 61.3
• PS3: 115.5
• PW1: 42.1
• PW2: 33.2
• PW3: 27.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_405322

• Blastp: Cysteine proteinase RD21A from Arabidopsis with 69.35% of identity
• Blastx: Cysteine proteinase RD21A from Arabidopsis with 69% of identity
• Eggnog: cathepsin(COG4870)
• Kegg: Link to kegg annotations (AT1G47128)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436931.1)
• Pfam: Cathepsin propeptide inhibitor domain (I29) (PF08246.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;