Id Trinity | TRINITY_DN49501_c0_g1_i6 |
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Name Transcript | Ll_transcript_405318 |
Sequence | TTCAGAGATTACTCATGCCTAATCAACATCAATTATTAATATTATTTTAATTATTATTAATTTAATACTAAATCCCCTCCCCCACTCTGTATAATATAAA GTCCAAGTTCATTCCCCTTTTCTCAATCCCACTCTCATTCTCTCTCAACTCTCATCAAAATCCTATCTATACCCAAAAAAAAATTCAAAAAGCCAACATG GGTTCGACTAGATCGAACACCTTCACCATGATGCTCCTCATTTTCACGCTCTTAGCACTTTCATCAGCCATAGACATGTCCATAATCTCGTACGACAAAA CCCACATTGACAGAACCAACGATGAGGTCATGGCCTTATACGAACAGTGGCTAGTGAAGCATGGTAAACTTCACAACGCGCTTGGTGAGAAGGAAAAGCG GTTCGAGATTTTCAAAGATAATCTCCGGTTCATTGATGAACATAATAATTATGATGTGAACCGGACCTATAAGCTTGGGTTGAACCGGTTCGCTGATCTG ACCAATGAGGAGTATAAAGCCAAGTTCGTTGGAAGTAGGATTGACCCTAATAGGAGGGTGGGTAAGTTGAGGACTAGGAGCAATCGTTATGCGCCACGTG TCGGTGATAAGTTGCCTGAGTTTGTTGATTGGAGGAAGGAAGGTGCTGTTGTTGGAGTCAAAGATCAAGGAGGATGTGGGAGCTGTTGGGCATTCTCAGC AATAGCTGCAGTGGAAGGCATAAACAAGATTGTGACAGGTGATCTGATTTCACTGTCAGAACAAGAGTTGGTAGATTGTGATTCATCATACAATGAAGGA TGCAATGGTGGAATTATGGACTACGCCTTTGAGTTCATCATCAACAATGGCGGCATCGACTCCGAAGAGGATTACCCTTACAAAGCTGTTGATGGTAGAT GTGACCAAAACAGGAAAAATGCTAAAGTTGTTGCAATTGATGGCTATGAAGATGTTCCTACATATGATGAGAAGGCCTTGCAAAAAGCTGTTGCGAATCA GCCTGTGGCCGTCGCTATTGAAGGAGGTGGCAGGGAATTCCAGTTATATGAATCCGGTATATTTACTGGTAAATGTGGAACTGCATTGGACCATGGTGTT AATGCTGTTGGATATGGTACAGAAAATGGCAAAGATTACTGGATTGTGAGGAATTCATGGGGTCCTAACTGGGGAGAAAATGGCTACATCAGACTCGAAC GTAATATAGCCAGCAGCAGAGCTGGCAAGTGTGGAATTGCAATCGAGCCATCTTATCCCGTTAAGAATGGTCAAAATCCTCCAAAACCCGGACCATCACC CCCAACACCTGTGCAGCCACCATCTGTCTGTGACAACGACTACAGCTGTCCTCAGAGCACGACTTGTTGCTGTATCTTCGAGTTTGGAAACTCTTGCTTT GCATGGGGATGTTGTCCTCTTGAGGGTGCTACTTGCTGTGATGACCACTACAGTTGCTGCCCACATGAGTATCCCATATGCAACGTTAATGCCGGAACCT GTCTAAGGGTACGACTAAAACTCCAGCTATTCTCTTATAAAAAATACTGAACAGCCAAAATTTTATGTTCCAAAATCTTTGTTAATGTGGGTACAGGGTA CTAGAATTTGGTAGACAAGACAGAACAGAACATATAAGTTCTGTTTAATATTTGGTCTATTTGTTAATTACAACATAACAAGATAATACATTTAAAAGTG AAACATTTTGGTTTGTGAAAAAAGAAAACAAAATGGAACATGTGATTCTGTTTGTTATGTCTGCATACCAAACACTACGAAAAGTGGATGAGTAGTCCTC CTAACTTACGATTAATCATCCTCGAGTTTTTGTGCAAAATTCTAGCTGATTCTGTAAAATCTTGCTTGCATGATAAAATATTTTTCATTCTCATTTCAAA CACAACATTATAAATTGTTTACTGTTTTGCTCATCTTGGTTTTGTGTGTTATAGAGCAAGAACAACCCATTTTGGAGTGAAAGCATTGAAGCGAATTCCG GCTCTGCTCCGCACTTCAGTCGGAAGTGGGAACGAGATAAGCAGTGCTTAAGCTGTTTAAGCAAATGTGTACGTGCAGAAAGAGCAGACGATGAATTCAA GGAGGGCGAAGGACTACAACACTAGTTGATTAGTCTTTTTCTTTTTTGCTTTCATTTATACTGCACTATAGGAATAAATCTACACCATTGTGATACAGTA CATGCTGTGTCAAGTTGCAGTCATACACTGACCTTGTACATAGGGTTATATTATGTGCTGTATTTGTATTCAAATTTTAAACTAGGGGCATGTTTGATTA TTGTAAGTTTCAAAGTTATGTAATTATGTGATCAAGAATCACAAGAACTTTTTCCTTCTTTATCCAAATGCAGCAAAGGTAATAAAAAGGGGTAGATGAA ATGTTTAATGGTAAAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_169877; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_405318
Blastp | Cysteine proteinase RD21A from Arabidopsis with 70.28% of identity |
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Blastx | Cysteine proteinase RD21A from Arabidopsis with 71.29% of identity |
Eggnog | cathepsin(COG4870) |
Kegg | Link to kegg annotations (AT1G47128) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436931.1) |
Pfam | Cathepsin propeptide inhibitor domain (I29) (PF08246.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |