Ll_transcript_405319

• Id Trinity: TRINITY_DN49501_c0_g1_i7
• Name Transcript: Ll_transcript_405319
• Sequence: CAAGTAATAAAAAAAAACTTTATCCTATGATGAATAAGTCGTGTGTTATACCTGAGTAGGGAACTAGGGAGTACAGTAGTTCTTCACTCCTTGTTGTATT CCGACAATTTAACTAGTTTCTGAGCAGTGACGAGTCTAAAGAAAATCTTATAACTTACTTACAAACTTTTTCTATCCTGAGACATGGTTAGTAAACACAA ATTGTATGAATTTGTTTTGATTAGGGAGCTGTTGGGCATTCTCAACAATCGCTGCGGTGGAAGGAATTAACAAGATTGTGACAGGTGATCTGATTTCGCT TTCAGAACAAGAACTGGTTGATTGTGATAGATCATACAATGAAGGATGCAATGGCGGACTTATGGATTACGGGTTCGAGTTCATCATCAACAATGGTGGC ATTGACTCTGACGAGGATTATCCCTACAAAGCAGTTGATGGTACTTGTGACCAATACAGGAAAACTGCTAAAGTTGTTACAATTGATGACTATGAAGATG TTCCTTCATATGATGAGAAAGCCTTACAAAAAGCTGTTGCAAATCAGCCTGTGGCTGTTGCTATTGAAGGAGGTGGCAGGGAATTCCAGTTATATGATTC TGGTGTATTTACTGGGAGATGTGGAACTGCATTGGACCATGGCGTTAATGCTGTAGGTTATGGTACAGAAAATGGTAAAGATTATTGGATTGTGAGGAAT TCATGGGGTCCTAACTGGGGAGAAGATGGCTACATAAGACTTGAGCGCAATCTCGCAAGTAGCAGATCCGGCAAGTGTGGAATTGCAATTGAGCCATCTT ATCCGGTTAAGGCTGGACAAAATCCCCCTAAACCTGGACCATCACCCCCTACACCTGTGAAACCACCATCTGTCTGTGACAATTACTATACTTGCCCTGA GAGCACTACTTGTTGCTGTATCTATGTGTATGCAAATACTTGCTTCGAATGGGGATGCTGTCCTCTTGAGGGTGCTACCTGCTGTGAAGACCATTACAGT TGCTGTCCACATGAATATCCTATCTGCAACATTTACGCCGGAACCTGTCTAAGGAGCATGAACAACCCATTTGGAGTGAAGGCATTGAAGCGAACTCCAG CATTGCGCCGCAATTCAGCTGGAGATGAGAACAAGATAACCAGTGCTTAATCTTTTATAAGCCAGAATGTGTATGTGCAGAAGGAGAGGGTGATGAAACT CAATGGAGAAAGAAGGACTAAAATGCTAGTTGATTATTTTTTTCCTTTTGTTTTCATTCATCCGTTGTGTTAGAAATTGATACATGCTGTGTCAAGTTTC TGTCATACATTGGCTTTGTACATAGGGTTATTTTATGTGCTGTATTTGTATTCACATTTCAAACAAGGAACTTATTTGATTTTTATAAGTTTCAAACTTA TGCAATTATGTGATCAAGCAAATCTGAATTCTTTATTCAGATGCAGCTGTATTTCCTTAAAAAATTGAGTAACCACTTCAGATGAATCTATTGTACTTTT AATCGTCTGTTTATATTTCTTGTTAGTTAATAATAATATAATGAATTATAGATGATGGATAATTA
• Tissue: pods
• Gene name: LI_gene_169877;
• Additional information: details;

Expression of Ll_transcript_405319

FPKM

• PAB: 31.7
• PNAB: 1
• PS1: 0.7
• PS2: 0
• PS3: 0.7
• PW1: 0.3
• PW2: 0.5
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_405319

• Blastp: Cysteine proteinase RD21A from Arabidopsis with 73.15% of identity
• Blastx: Cysteine proteinase RD21A from Arabidopsis with 75.91% of identity
• Eggnog: cathepsin(COG4870)
• Kegg: Link to kegg annotations (AT1G47128)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429831.1)
• Pfam: Papain family cysteine protease (PF00112.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;