| Id Trinity | TRINITY_DN49501_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_405321 |
| Sequence | AGCTAACCCATATAGTTATTTATATGTCCATGTTCATCCACTTTTTCTCCATCCCCTCTTTCACTCTTCACCCATCATCAACACTTTCTCTCTTCAACCC AACCAAAAACATGGCTTCAACTAGATCAAAGACCTTCACCATGATCCTCATCATGCTCACACTCTTAACCCTTTCATCAGCCATAGACATGTCCATAATC TCTTACGACAAAACCCACATGAACAAAAACAACGACGAACTCATGACCCTATATGAAGAGTGGTTAATAAAACATGGTAAGCAATATAACGCACTGGGTG AGAAGGAAACCCGGTTCGAGATATTTAAAGAGAATCTCCGGTTCATTAACGAACATAATAACGGTCTGAACCGGACCTATAAGCTTGGGTTGAACCGGTT CGCTGATCTGAGTAACGAAGAGTATAGGGCTAAGTTTCTTGGAACTAGGCTTGATCCTAAGAGGAGGATGGTTAAGTTGAGGACAAGGAGCAATCGTTAT GCGCCACGTGTCGGTGATGAGTTACCGGAGTTTGTTGATTGGAGGAAAGAAGGTGCTGTTGTTGGAGTCAAAGATCAAGGAAGCTGTGGGAGCTGTTGGG CATTCTCAACAATCGCTGCGGTGGAAGGAATTAACAAGATTGTGACAGGTGATCTGATTTCGCTTTCAGAACAAGAACTGGTTGATTGTGATAGATCATA CAATGAAGGATGCAATGGCGGACTTATGGATTACGGGTTCGAGTTCATCATCAACAATGGTGGCATTGACTCTGACGAGGATTATCCCTACAAAGCAGTT GATGGTACTTGTGACCAATACAGGAAAACTGCTAAAGTTGTTACAATTGATGACTATGAAGATGTTCCTTCATATGATGAGAAAGCCTTACAAAAAGCTG TTGCAAATCAGCCTGTGGCTGTTGCTATTGAAGGAGGTGGCAGGGAATTCCAGTTATATGATTCTGGTGTATTTACTGGGAGATGTGGAACTGCATTGGA CCATGGCGTTAATGCTGTAGGTTATGGTACAGAAAATGGTAAAGATTATTGGATTGTGAGGAATTCATGGGGTCCTAACTGGGGAGAAGATGGCTACATA AGACTTGAGCGCAATCTCGCAAGTAGCAGATCCGGCAAGTGTGGAATTGCAATTGAGCCATCTTATCCGGTTAAGGCTGGACAAAATCCCCCTAAACCTG GACCATCACCCCCTACACCTGTGAAACCACCATCTGTCTGTGACAATTACTATACTTGCCCTGAGAGCACTACTTGTTGCTGTATCTATGTGTATGCAAA TACTTGCTTCGAATGGGGATGCTGTCCTCTTGAGGGTGCTACCTGCTGTGAAGACCATTACAGTTGCTGTCCACATGAATATCCTATCTGCAACATTTAC GCCGGAACCTGTCTAAGGGTATGTCTAAAACTGCCGCTAATTTTTTTTAATATGAATATGACATAGTCAGACCGTTAACACTGATATCCAGAAACTAGAA ATAGAGATGAGATAGGAAGAATAGAACCAAGGATTCAATCCAATTGGATTTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_169877; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_405321
| Blastp | Cysteine proteinase RD21A from Arabidopsis with 70.43% of identity |
|---|---|
| Blastx | Cysteine proteinase RD21A from Arabidopsis with 70.55% of identity |
| Eggnog | cathepsin(COG4870) |
| Kegg | Link to kegg annotations (AT1G47128) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429831.1) |
| Pfam | Cathepsin propeptide inhibitor domain (I29) (PF08246.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |