Ll_transcript_406906

• Id Trinity: TRINITY_DN49504_c0_g3_i2
• Name Transcript: Ll_transcript_406906
• Sequence: TATATCTCTAGGTAATATTTCAATCAATCTTTTGATGAAAACCATTTTTAGGTGTAATAATAGACAAGTATTCTTATCTGCTCTCCTTATCCTCACTTCT AGTGGAATGAAAATAAATATAATAAAAAACAAAAAAACAGAAAAGGTATGCGAAAATAAGAAACCTAGGTAAAGCAAACTTGAACGGAAATAGTGAGGTT TTGTATTCTGAATCTAACACGGTGCCGTTTGTTCATAGTTGAAGGCATATAGAAGAAGAAACAATGGCGGCAAAAGCTTTGGGTTTCTCTGTAACTCTCA ATGACCTTTCGAACCGTTTCGGATCTAAATCACAACCCATTTCTCAAAAAGTTCGTGTTTCTACTCTCAGATGTTCTGCTGGGAAGGGAGAAAGACCTTG GAAAACATCAGATGCTAGACTTGTGCTAGCAGATGGGTCAATATGGAATGCAAAGTCATTTGGTGCTTCGGGAACACAAGTTGGTGAAGTTGTTTTTAAT ACATCATTGACCGGGTATCAAGAAATTATAACAGATCCTAGTTATGCTGGCCAGTTTGTGCTAATGACCAATCCACATATCGGTAATACCGGCATAAATT TTGATGATGAGGAATCAACACAGTGCTTCCTTGCTGGTCTAGTAATTAGAAGTCTGAGTATCAGTACCTCAAACTGGAGATGTGTGGAAACGCTAGGTGA TTACTTAGCAGAAAGGAATATCATGGGAATTTATGATGTTGATACACGTGCCATCACTCGCCGATTACGTCAAGATGGAAGCCTTGTTGGTGTCCTGAGC ACTGACAACTCGAAAACTGATGAGGAACTACTTCAGATGTCTCACTCATGGGACATTGTTGGTATTGATCTTATAAGTGGAGTATCGTGCAAGTCTCCAC ATGAATGGGTTGATAAAACAAAGCAAGACTGGGAATTCAGTTCTAAAGGGCTCGGGGATAATTTCCATGTTGTTGCTTATGATTTTGGAATCAAGCATAA TATACTAAGGCGCCTGGCGTCTTATGGCTGTAAAATCACTGTTGTGCCATCTACATGGCCAGCATCAGATACTTTGAAGCTGAAGCCAGATGGGGTACTT TTCAGCAATGGCCCGGGAGATCCATCTGCTGTCCCTTATGCCGTTGAGACGGTAAAGAATATTCTGGGAAAGGTACCTGTTTTTGGAATTTGCATGGGCC ATCAATTGCTAGGCCAGGCTTTAGGAGGCAAGACCTTTAAGATGAAATTTGGTCACCATGGAGGAAATCACCCTGTTCGTAACCTTCGAACTGGCAATGT TGAAATTAGTGCTCAGAACCACAACTATGCGGTTGACCCTGCAACACTGCCAGAAGGAGTGGAGGTTACTCATATCAATCTAAATGATGGAAGCTGTGCT GGTCTTGCTACTTACCGAACAATGTCTCTTCAATACCACCCCGAAGCATCCCCCGGACCTCATGATTCTGATTACGCATTTAGGGACTTTGTTGAACTAA TGAAGAGGGAAAAGGTCAACAAACGTGAGCCCCAACTATCAGCAGTGTCTGCTAGGAATGCATAATGCTTGAAGCTGATAACAGGATGAAAAGTATTTGG TGGAAGCTTAGGTTTGAAGTTAGTCATGTTCTATCATCTTTGACCCAAGAGGGTTGATTGAGGTTTAGTTTCACTCTTTTTGTACTAAGGGCATGCATGC CTAAAGTTGTTGTGACAATTTGACCCCGAGTGAGGGTTTCATGTACTTTTGTTGAGAGAGTAATAATGAGCTCAAGGTTTTTATACTCCCCCAATCCATT GATGATTATTAAGATGAATACTTCTTAGATTTGTTTAGAGTATGTTAAAAGATCCTTTTACATTATTTTTTTAATGATTTGTGTACTTATTTAAAAA
• Tissue: pods
• Gene name: LI_gene_169891;
• Additional information: details;

Expression of Ll_transcript_406906

FPKM

• PAB: 5.5
• PNAB: 46
• PS1: 30.4
• PS2: 36.6
• PS3: 28.6
• PW1: 29.2
• PW2: 23.6
• PW3: 17.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_406906

• Blastp: Carbamoyl-phosphate synthase small chain, chloroplastic from Arabidopsis with 73.61% of identity
• Blastx: Carbamoyl-phosphate synthase small chain, chloroplastic from Arabidopsis with 73.61% of identity
• Eggnog: carbamoyl-phosphate synthetase glutamine chain(COG0505)
• Kegg: Link to kegg annotations (AT3G27740)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459030.1)
• Pfam: Carbamoyl-phosphate synthase small chain, CPSase domain (PF00988.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;