| Id Trinity | TRINITY_DN49504_c0_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_406909 |
| Sequence | TATATCTCTAGGTAATATTTCAATCAATCTTTTGATGAAAACCATTTTTAGGTGTAATAATAGACAAGTATTCTTATCTGCTCTCCTTATCCTCACTTCT AGTGGAATGAAAATAAATATAATAAAAAACAAAAAAACAGAAAAGTTGAAGGCATATAGAAGAAGAAACAATGGCGGCAAAAGCTTTGGGTTTCTCTGTA ACTCTCAATGACCTTTCGAACCGTTTCGGATCTAAATCACAACCCATTTCTCAAAAAGTTCGTGTTTCTACTCTCAGATGTTCTGCTGGGAAGGGAGAAA GACCTTGGAAAACATCAGATGCTAGACTTGTGCTAGCAGATGGGTCAATATGGAATGCAAAGTCATTTGGTGCTTCGGGAACACAAGTTGGTGAAGTTGT TTTTAATACATCATTGACCGGGTATCAAGAAATTATAACAGATCCTAGTTATGCTGGCCAGTTTGTGCTAATGACCAATCCACATATCGGTAATACCGGC ATAAATTTTGATGATGAGGAATCAACACAGTGCTTCCTTGCTGGTCTAGTAATTAGAAGTCTGAGTATCAGTACCTCAAACTGGAGATGTGTGGAAACGC TAGGTGATTACTTAGCAGAAAGGAATATCATGGGAATTTATGATGTTGATACACGTGCCATCACTCGCCGATTACGTCAAGATGGAAGCCTTGTTGGTGT CCTGAGCACTGACAACTCGAAAACTGATGAGGAACTACTTCAGATGTCTCACTCATGGGACATTGTTGGTATTGATCTTATAAGTGGAGTATCGTGCAAG TCTCCACATGAATGGGTTGATAAAACAAAGCAAGACTGGGAATTCAGTTCTAAAGGGCTCGGGGATAATTTCCATGTTGTTGCTTATGATTTTGGAATCA AGCATAATATACTAAGGCGCCTGGCGTCTTATGGCTGTAAAATCACTGTTGTGCCATCTACATGGCCAGCATCAGATACTTTGAAGCTGAAGCCAGATGG GGTACTTTTCAGCAATGGCCCGGGAGATCCATCTGCTGTCCCTTATGCCGTTGAGACGGTAAAGAATATTCTGGGAAAGGTACCTGTTTTTGGAATTTGC ATGGGCCATCAATTGCTAGGCCAGGCTTTAGGAGGCAAGACCTTTAAGATGAAATTTGGTCACCATGGAGGAAATCACCCTGTTCGTAACCTTCGAACTG GCAATGTTGAAATTAGTGCTCAGAACCACAACTATGCGGTTGACCCTGCAACACTGCCAGAAGGAGTGGAGGTTACTCATATCAATCTAAATGATGGAAG CTGTGCTGGTCTTGCTACTTACCGAACAATGTCTCTTCAATACCACCCCGAAGCATCCCCCGGACCTCATGATTCTGATTACGCATTTAGGGACTTTGTT GAACTAATGAAGAGGGAAAAGGTCAACAAACGTGAGCCCCAACTATCAGCAGTGTCTGCTAGGAATGCATAATGCTTGAAGCTGATAACAGGATGAAAAG TATTTGGTGGAAGCTTAGGTTTGAAGTTAGTCATGTTCTATCATCTTTGACCCAAGAGGGTTGATTGAGGTTTAGTTTCACTCTTTTTGTACTAAGGGCA TGCATGCCTAAAGTTGTTGTGACAATTTGACCCCGAGTGAGGGTTTCATGTACTTTTGTTGAGAGAGTAATAATGAGCTCAAGGTTTTTATACTCCCCCA ATCCATTGATGATTATTAAGATGAATACTTCTTAGATTTGTTTAGAGTATGTTAAAAGATCCTTTTACATTATTTTTTTAATGATTTGTGTACTTATTTA AAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_169891; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_406909
| Blastp | Carbamoyl-phosphate synthase small chain, chloroplastic from Arabidopsis with 73.61% of identity |
|---|---|
| Blastx | Carbamoyl-phosphate synthase small chain, chloroplastic from Arabidopsis with 73.61% of identity |
| Eggnog | carbamoyl-phosphate synthetase glutamine chain(COG0505) |
| Kegg | Link to kegg annotations (AT3G27740) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459030.1) |
| Pfam | Carbamoyl-phosphate synthase small chain, CPSase domain (PF00988.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |