Ll_transcript_406297

• Id Trinity: TRINITY_DN49508_c0_g2_i1
• Name Transcript: Ll_transcript_406297
• Sequence: CCGCGGTGTTATTAACCCGTAACACCCTTTTACACAAACGCCTCCTCCTATACACTATTCAAAAAACCCTACATAAACAATATTTCAATTATCATAAATA AAAAAAGAGCCACATTTCCTATTCCTACTCCAGCTTAGTCTATTGTTGTAATTCACCCGAACAATTGTTGGGTCTTCTTATTCTTCTTATCTGTTTCTGT ATTTCAATTTTCAGCGACCACATCAAACTTCATTTAGTTGCCATCTTCCTTCATTTCTCTATGGGTCTTCCACTACTTTCTTCTTCGTTTTTGGATCCCT CCTATAATAACGGTGTTTTCTGCAGCATGGAGTTTATGAGGCCTCCACTATCAGCTTCTAAGTCATATTCTCCTGCTTTGAAGTTCAAGTGTCAACAATT TCACAAGGGTGGGCTAACATCACCAGGGGTTATACTCTGTGCCAGTCAAAGGCCCAGAGGTCATAAAAGTGTGTGGAGACGAGAACCATTACCCCAAAAT GTGGATTTTCCAACACCTTTCCCAAAGAAAAAGAAAAAACCATACCCTATTCCCTTTAAAGAGATTAAAAAGGCTGGAAGGGAGGATAAAAAACTTGCAA ATATGGGAATAGAGAAGCCTCTTGAGCCTCCAAAGAATGGATTGCTTGTTCCTGACCTTGTTCCTGTTGCTTATGAAGTATTTGATGCTTGGAAGCTTTT GATCAAAGGTCTTGCCCAGCTTTTGCACGTCATTCCTGTACATGGCTGTAGTCAATGCTCAGAAGTTCATGTTGGTCGAAATGCTCACCGCATTCTGGAT TGTGATGGTTCTACCAGTTCTCAGCGTCATAGTTCCCATTTATGGGTCAAGGGTTCCATCAATGATATACTTGTCCCAATTGAGTCCTATCATCTCTTTG ACCCCTTCGGTAGGCGCATCAAGCATGATACACGGTTTGAGTATGACCGGATTCCAGCTGTTGTTGAGCTATGCATTCAAGCTGGTGTGGATATCCCAGA GTATCCTTCACGCCGAAGGACCAACCCTGTAAGAATGTTAGGGAAGAAAGTACTTGACAGAGGCGGAAATGTAGAGGAACCTAAACCATGGCGCTTTGCA GAGTCTTCTTCACTTATTGAGTTTGATACTTACAGAGCTTCCGAGCGATTTCCATGTCCACCTTTGTCAAATATACCTGAAATTGCCCAAGAAACAATTG GCGCATATGAAATCGTAAGAAAGGGTGTCACGAGGTTGATGAAGAAATACACTGTGAAAGCATGTGGTTATTGCTCAGAAGTCCATGTGGGACCATGGGG CCACAATGTTAAGCTTTGTGGGTCATTTAAGCACCAATGGAGGGATGGGAAGCATGGTTGGCAAGATGCTACTGTTCGTGAAGTTTTTCCTCCAAATCAT GTGTGGCATGTTAGAGACCCTAGTGGACCTCCGTTGAGGAATAAACTGAAGACATTTTACGGAAAGGCTCCAGCTGTGATTGAAGTGTGCATGCAAGCTG GTGCACAGATCATCCCAGACGTGTACAAGCCCATGATGAGGCTTGACATTGTAATCCCGGACAGCGAAGAGGCAAGAATGATTGCATGATGATCAAGTGC AGTTTATACAATGATATGTTCCATCAGAAGTGGAGGTATTCTACAGCACATGTCTGATTCATAGACTAGAGGAATTTTAGTGTACATGTATACAAGCCAA TAGAAGATGTAGCAGTAGGTTAAATTACTAAATTTTGGTTCATCAATTTCTGTATAATGTCTTAAACTAGTGAAAAATTATGTAGGAAGAGGCATATGTT AATTTATTGTATGTTACAAATACAACACAATCAAGTGGAG
• Tissue: pods
• Gene name: LI_gene_169921;
• Additional information: details;

Expression of Ll_transcript_406297

FPKM

• PAB: 1.4
• PNAB: 2.4
• PS1: 2.2
• PS2: 1.6
• PS3: 1.8
• PW1: 3.5
• PW2: 3
• PW3: 2.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_406297

• Blastp: APO protein 1, chloroplastic from Arabidopsis with 63.61% of identity
• Blastx: APO protein 1, chloroplastic from Arabidopsis with 63.61% of identity
• Eggnog: APO protein(ENOG410XP6U)
• Kegg: Link to kegg annotations (AT1G64810)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414110.1)
• Pfam: APO RNA-binding (PF05634.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;