| Id Trinity | TRINITY_DN49508_c1_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_406328 |
| Sequence | CTCTCACATCGATTCTCAATAATCGATTATTCGTTTTTCTTCATTTTTCAATTTCCATTCCTTTCGGTGCCGTTTTGTTTCTTCAATTTCTTCATTATCA TGCCGTATTTGAAATAATCGAGATGTGACGTTGGTGAATTAGGGTTCCAGTGTTCCTATGTTTTTTCACTCTGCAATGAAATAGAAAAGTTGTTAATCGG ATTATTTAACTCATATAGGGATTTGAACTTGATTTCGTTTATGTCTTGCGTTTTGAATAATCTGCTATTTTAGTTTAGTTAGTTTTGGCTACGATTTTTC AATTTGCGTTCTTTGTTATTCTTATCTGTTTAATATTTAATTTAATGTTTTTTTGTTGAATTTGAGCTTTGGAGAGTAGAGTTGTAGCTACCTGCATTGA ACTTGTTTTGAAATTAAACTATTGCCTTAGGTTCCGTTTGTGTGAGATTGAAGAAATTGATTTTAAAATATTCTGAAGAAGTGATTTTGGTTGTATATCT TATATGTAATTGGGAAGTGGTTATGCTTTTAGCTAGTTGCTATAATTAAAAGAAAGGTGGTTTTTTACTCTCTTCTCTTTTGGAGAATCTGAAAAGTGTA CCCTCTAATTTCAGCTTTTTTTACGGCTATTGCTTTTTAGTATCAATTAAACAAACATGTAAATGTTAGTAGTGATTTTATTATAAAAAGCATTTTTTTG TGGTTGAAAATAGCTTAAATAGATGAGCCCCTTGTTTCATATCTTTTGAATGTTGTTGGCAATATACTTGAATTGTTTTTTGATGATGACTGTGGAGGTC CTTGATTTGCTTTAAGATTTGAAATTGTGTTTATTATTGATGAGATCTTTTGCCTTGTCAATTGGTAATTTGTGATGCTATCTTTAATATAGTTGATTCG ATTACTTACTGCTGCACTATGTTTTTCTCTACAGTGAGCGTAAAATGGCAAAAGGAGCTTTTGAAAGATGTAGAAATTGATGTGACACAACCTCCATATG TTTTTAAGTGCCAATTGTATGATCTAACAGGGGTACCTCCAGAAAGACAAAAGATTATGGTCAAGGGTGGTCTGTTAAAGGATGACGCAGATTGGTCTAC ATTAGGAGTGAAACAGGGTCAAAAGCTAATGATGATGGGAACAGCAGATGAAATTGTGAAATCTCCAGAGAAGGGAACTGTTTTTGTTGAAGATCTTCCT GAAGAAGAGCAAGTAGTTGCTATTGGGCATACTGCAGGGCTTTTCAATTTGGGAAATACCTGTTATATGAACTCAACATTGCAATGCCTCCATTCCGTGC CAGAATTGAAGTCAGCTCTGATTAAGTACTCACATTCAGGACGAACCAATGATGTTGATCAAACCTCCCATATGTTGACCATTGCTACCCGTGATTTATT CAATGAGCTTGATAAAAGTGTCAAGCCTGTAGCTCCAATGCAATTTTGGATGGTGTTACGGAAAAAGTATCCTCAATTTGGCCAGCTGCATAATGGGGTG TTCATGCAACAGGATGCTGAAGAATGTTGGGCGCAACTCCTGTACACACTTTCTCAGTCTCTCAAGTCCCCTGGATCAAGTGAAAATTCTGATGCAGTGA AAGCTCTTTTTGGTATAGAACTGAATAGCAGGGTTCATTGCCAAGAGAGTAATGAAGAAACCTCAGAAGCGGAATCTGTTTATTCACTTAAATGCCATAT ATCGCACGAGGTGAACCATTTGCATGAAGGACTAAAACATGGATTAAAATCAGAGTTGGAGAAGGCTTCTCCTGCTTTGGGCCGTAGTGCTATTTTCTTG AAAGAATCACGCATCAATGCCCTGCCAAGGTACTTGACCGTTCAGTTTGTTCGATTTTTTTGGAAAAGGGAATCCAACCAAAAGGCTAAGATCTTACGGA AAGTGGATTATCCTCTGGTGTTGGATGTTTATGATTTTTGTTCGGATGATCTACGTAAAAAGTTGGATGCTCCTAGACAGATCCTAAGAAATGAGGAAGG CAAGAAGTTTGGTCTGAAAGGCAATGAGAAAAGCTCTACTGGGAAGGAAAATGATGTCAAAATGTCTGATGCTGAGGGATCATCAAATGGAGGAGGGGAG CCATCTGTAGCTCCAATGGAAGAAGGTGAAAAAGAAGCACAGTTGACTGGAATTTATGATTTGGTTGCTGTGCTGACCCACAAGGGTAGAAGTGCCGATT CAGGACATTATGTTGGTTGGGTCAAGCAAGAAAATGGGAAATGGATAGAGTTTGACGATGACAATCCCAAACCAAGAGTAGAAGATGACATCACTAAACT ATCTGGAGGAGGTGATTGGCATATGGCATACATAATCATGTACAAGGCTCGCGTTGTATCTGTGTAATTTGTAAGGAGAGTTCATTTGGCGTTTTACTGG AAATTTGAGGATTGTGGGAAAAAAAGGTCTACTTTAGCAGTATCCTTGAGGTTTGATGCATGTTAGTTAATTTTCATTCGTTAAGTTTAACCATTGTATT TTATTTATTTAAATGAGTGGAGAATAAAGTAGATTTGAATTGAAGTTTGTTATCTCTTGCATTGACTGAGCCCAAGGGGAGTTGAATATGAAGTTATATT TATATAATAGTCAGGTGAATAAGGTCTTTAAAAAAGGAAAACAGGTAAATCATTCATAACAACTTTTTAGTTAGAACTTAGGACTTTGACAGTTACATGG ATAAAAGAAAAGATTAAAAGGAATACCTAGTTTTATTGTAGTTTCCTTTGTTAAGAAATTAGTTTCCTTCATTTTCTATATAGTATCATTCAGCTGTAAT GCTTCCACCATTCTTAATCAGCCAATAATGCATGCTTCTATAAAACTTCGTACTTCTATTAATAAGATAGTAAACAATGACATGAATTTTTTTGATGTAC AAGTGCTCAATTTATAGAAGTATCATGGAGAATGGAGAAAATAACCTCTCCATGAAGCGAGAGCGAGAGCGGAGAAAGGTAATCAACACATCCCCACTAA TCTAATGTATTGATTGTCAGCCATTACTACATTAGAGTATTTATTCAACTTAGTAACTTTCAATATCATGAACTGGTTGTTAAATTAATCTAATAATTTC ATGTCACATGGTCCATATCATCTCAAGATTCATAATTTAATTGAAATGATTGAATAATGACCGTAATCATCTTAACTAACTCTAATGAAGATTCATATCA TTTTCTATGTACCGTAATCATCTTAACTAACTTTATTTGATTTTTCATTGAGTTATCTTATTATAAGTGTGTAAGTACATTCTAGATAATAAAAAGCAAA CATGTATACATTAATGTTTATGTAGGTACCATCATATTAATAAGGATTCATGTGTTATGCTACTCATTTTTACATGGTCAATGTAACTATTTAACAGATC TCTTACATCATATTAATAAGGATTCATCTGTTATGCTAATCATTTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_169923; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_406328
| Blastp | Ubiquitin carboxyl-terminal hydrolase 6 from Arabidopsis with 76.72% of identity |
|---|---|
| Blastx | Ubiquitin carboxyl-terminal hydrolase 6 from Arabidopsis with 76.89% of identity |
| Eggnog | ubiquitin thiolesterase activity(ENOG410XP96) |
| Kegg | Link to kegg annotations (AT1G51710) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456594.1) |
| Pfam | Ubiquitin family (PF00240.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |