Ll_transcript_407713

• Id Trinity: TRINITY_DN49511_c0_g1_i18
• Name Transcript: Ll_transcript_407713
• Sequence: CTCTTTTTTTATCCAATCACAAGTTTCTTCATAGATTTATTACTTTTTTTTATGTTGCATCAATGATTTTTTCTATATTCTGATCATGCCCTTTTGGAAT TTTGTTTTTTGACATCCATGTTTTCGTTTTCTAGGAATTGAATTTGCATGATCATAGAAAAAAGTTGGGATTTTTACCCGAAAAACCAGATTTTTATCAG TTTATTCAAGTTGGGTATTTGTGATTTGTTTCTTTTGCATGTTTGAGATGTAGATTGTATTATTTAGATCCCTTTGTCTATTTCACTTGTTCTTCTGAAT TTAGTTGTTTGTGATCAAATTGATGAAATTAATGTATTACATTCTTATAGATTTGTCATTCATATGTTCTGTGGCTTTTTGAATTCATGAATTCAGCATT TGTGTTTTTTGTTGTTGTTCCTGAATTTTTTTCATTTTGATTCATTGTTTAGAATTTGTGTGCTTGCTTATTGAGCATGTGGATCATACTATTGAATTAT ACATGCTACTGAATCTCCCCTTTATTGATATTAAGCTTTTCCTTCCTTTTTGTTTGCTATGAAATTAGGTTTCTTCGGTTGTGTGAGGGTGTCTTGTAGT TGGAGCTATGGCGCTTGAGATTGCGGGATTTGAGGTGGTTCAAGGACCAGTGGAGAACGATGCTGAAAGAGTCAAATCTGTTTTACATGAAAAGGATAAT GGCAAACTGGAGCAAGCTCAGGGAGTTGGTGAACCCATAATATTTGGGTCACATGGAGATGAATCTGCGAAAGGGGACGTGAAAGAAGCTTCAGATGCCA CTGTTCCGAAAGATGCAGTTGAAGAGTGGCCTGCGCCTAAGCAGATTCATTCTTTTTATTTTGTCAGGTGCCGGCCTTATGATGATCCAAACATCAAATC TAAAATTGATCAGATTGATAAAGAGATGAACAAGAAAAGTCAAGCCCGGTTTCAGGTTACTGAAGCACTGAAAGCAAAGCGGTCAGAGCGAGCTGAGTTG ATTTCTCAGGTTAAGTCTCTAAATGGTGACCGCAGGCAATATCAGAGTACGGTGGATGAGAAATTGAGGGAGATTGGACCTCTGCAGCAGGCACTGGGCA AGCTGCGTACTGCTAACAATGCGGGTCGGGGTGGTTTATGCTCATCTGAGGAGGAACTTAATGATGCTATATATAGCTTACAATACCGCATTCAGCACGA AAGCATTCCATTGTCTGAGGAGAAGCAGATCATTCGAGAAATCAAACAGCTTGAGGGAACAAGGGAGAAAGTTATAGCTAATGCTGCCGTGAGGGCCAAG GTACAGGAGTCTGTTGGGAAGAAAGAAGTCATTCAAGATCAGGTTAAGCAAATGGGTGGAGATTTGTCTGGAGTCATGAAGGAGAAACATGCAGTCGCGG CAAAGATTAAGATAATTGATAAGGAATTGGAAACCATAGACAAAGATATCCAGGTTCTACAGGATGAACTAAACGCTATTACTGTGAAGAAGGACGAGGA TTTTGAGAGCATTCAGAAGTTGAGAAAACAGCGCGACGAGGGGAATGGTTATTTCTACCAAAGTCGCCAACTTTTGAACAAAGCTAAGGAGCTTGCTGCA AAGAAAGATATTACTGCTCTCGAGGAACTTGCACAGACAGAGGTTGAGAAGTTTTTGTCACTCTGGAACAGTGACAAAACTTTCAGGAATGACTATGAGA AAAGAATTTTGACATCATTGGACATGCGGCAGTTGAGTAGGGATGGACGGATTAGGAACCCAAATGAAAAGCCACTGGTGGAAGTGCCAAAACCTGCTGA GGCTGTTGCGTTAAAAAAAGCCACCCCAAAACAGCCAAAGGAGGAGCCTAAGCCTTCTCCACCAGTAACTTTGCCTACTCCGGTGGTTGAGAAAGAATCC AAAAACAAAGGGAAAGATTCGAAGTCAAAACCGGATAGCAAGGACTTAGGAGAAGCTGATGAATTTGAGTTTGAAAATCCTCACAAGGAGATTCCTATCA AAAAGCCTGAACTTGATCCTACGAAGTTGAAAGAGATAAAAAGAGAAGAGGAAATTGCGAAGCAAAAGCTGGCCTTGGAAAGGAAGAAGAAGCTAGCAGA GAAAGCTGCAATTAAAGCAGCTCAAAGAGCACAAAAAGAAGCTGAAAAGAAGCTTAAGGACCGCGAGAAGAAGGCAAAGAAGAAAACTTCTGGCACGGCA ACCGTTCCTGATGCTGAGGAACCAGAAGAGGCAGTAGTGGATGCTCCTGAACCAGAAAAGGTTGATGATGACATTGAACCTGCTGCTCCAGTGAAGGAAA AGGTCCCCAAGGCTGGTATCAGGTCCAGGAGCCGAGCAGTCGGCCCTGCCCCGATTCAAAAAGCTATTCTTAAGCGGAAGAAGTCGAACAATTACTGGGT TTGGGCTGCAGCTGCTGCTTCATTAGTCCTGATACTGCTGGTGCTTGGTTACACCCAACTTTTCTGAAAAAGTTTAGATCTAGAAGATGCTGTAAACCAA TTTTCCCAGTGAGGTGTCTAGAGGTTTTTCAGGGTAGCCTTAAGTTATTTCTGTTCTATACATCCTCTTAGCCTCTTAGGGGAATGGATCAAAATATACT GTTGTTCTTTTAGCTCCTGTTTTGGGGAAACACTGCATACATTTACATTTAGTTTGACTATGGATTTTCAAATTTTGTGGTGGATGTTCACTTGAAGCTT GAGTTTGTTTTGTTATTTAATTATCTAGAGAATGCTAACATTACATTCTAAATTTTGTATTAGAAAACCTTACATGTTGCTTATATAGTCTTTTATGATA TGATGTTGAACACAATTTGTGACAGGATATATAAGGCTTCAAAATTAAACTAAGCA
• Tissue: pods
• Gene name: LI_gene_169959;
• Additional information: details;

Expression of Ll_transcript_407713

FPKM

• PAB: 0.6
• PNAB: 0.3
• PS1: 0
• PS2: 0.2
• PS3: 0.2
• PW1: 0.9
• PW2: 0.4
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_407713

• Blastp: Proton pump-interactor 1 from Arabidopsis with 48.82% of identity
• Blastx: Proton pump-interactor 1 from Arabidopsis with 53.13% of identity
• Eggnog: proton pump interactor(ENOG4111QP9)
• Kegg: Link to kegg annotations (AT4G27500)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443948.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;