Ll_transcript_407718

• Id Trinity: TRINITY_DN49511_c0_g1_i23
• Name Transcript: Ll_transcript_407718
• Sequence: CAACGTTTTTACTGTTTGGAGAAATGAAGATAGCGAAATCCAATGCTGAACCTGAATTAATCTTCACATTCATTTATATAAATACTGCCACTGTTACATA ATATTCTCTCTCTTTTTCTCTCTCTTTGCAACTTGTTTTGGAGAGACTTTTTTCAAAGGGGTCTTTTCTATTCACACCGGTTTCTTCGGTTGTGTGAGGG TGTCTTGTAGTTGGAGCTATGGCGCTTGAGATTGCGGGATTTGAGGTGGTTCAAGGACCAGTGGAGAACGATGCTGAAAGAGTCAAATCTGTTTTACATG AAAAGGATAATGGCAAACTGGAGCAAGCTCAGGGAGTTGGTGAACCCATAATATTTGGGTCACATGGAGATGAATCTGCGAAAGGGGACGTGAAAGAAGC TTCAGATGCCACTGTTCCGAAAGATGCAGTTGAAGAGTGGCCTGCGCCTAAGCAGATTCATTCTTTTTATTTTGTCAGGTGCCGGCCTTATGATGATCCA AACATCAAATCTAAAATTGATCAGATTGATAAAGAGATGAACAAGAAAAGTCAAGCCCGGTTTCAGGTTACTGAAGCACTGAAAGCAAAGCGGTCAGAGC GAGCTGAGTTGATTTCTCAGGTTAAGTCTCTAAATGGTGACCGCAGGCAATATCAGAGTACGGTGGATGAGAAATTGAGGGAGATTGGACCTCTGCAGCA GGCACTGGGCAAGCTGCGTACTGCTAACAATGCGGGTCGGGGTGGTTTATGCTCATCTGAGGAGGAACTTAATGATGCTATATATAGCTTACAATACCGC ATTCAGCACGAAAGCATTCCATTGTCTGAGGAGAAGCAGATCATTCGAGAAATCAAACAGCTTGAGGGAACAAGGGAGAAAGTTATAGCTAATGCTGCCG TGAGGGCCAAGTTACAGGAGTCTATTGGGCCGAAAGATGCCATTAAAGATCAGGTTAAGCAAATGGGTGGAGATTTGTCGGGAGTGATTAAGGAGAGACA AGCCATTAGTGCCAAGATCAAGAAAATTGATGAGGAACTGAAAATCATAGACAAAGATATCCAATCTCTACAGGATGAACTGGAAGCTATTACCAAGAAG AAGGACAAGGATTTTGAGAGCATTCAGCAGTTGAGAAAGCAGCGCGGTGATACGAATGCCTATTTCTACCAAAGTCGTCAAGTTTTGACCAAAGCTAAGG AGCTTGCTGCAAAGAAAGATATTAAGGCTCTCGAGGAATTTGCACAGACAGAGGTTGAGAACTTTATGTCACTCTGGAACAGTGACAAAACTTTCAGGAA TGACTATGAGAAAAGAATTTTGACATCATTGGACCAGCGGCAGTTGAGCCGGGATGGGCGTATTAGGAACCCAAATGAAAAGCCACTTGTGGAAGTGCCA AAACCTGCTGTGGCTGATGCATTATCAAAAACCATCCCGAAACATCCAAAGGAGGAGCCTAAGCCTAAGCCTTCTCCACAAGAAACTTTGCCCACTCAGG TGGTTGAGAAAGAAACCAAAAACAAAAGTAAAGATTCGAAGTCCAAGCCGGATAATAAGGATTTAGCAGAAGCTGACGAATTTGAATATGAAAATCCTCA CAAGGAGACTACTATCAAAAAGCCTGAAATTGATGCTAAAAAGTTGAAAGAGATAAAAAGAGAAGAGGAAATTGCGAAGCAAAAGCTGGCCTTGGAAAGG AAGAAGAAGCTAGCAGAGAAAGCTGCAATTAAAGCAGCTCAAAGAGCACAAAAGGAAGCTGAGAAGAAGCTTAAGGACCGTGAGAAGAAAGCAAAGAAGA AAACTTCCGGCTCTCCTACTGTTTCCAATCCCGAGGAACCAGAAGATGAAGTAGTGGAGGCTACAGAACCAGAAAAGGTTGATGATAACGTTGAGGTTGA GGTTGCTGCTCCGGTGAAGGAAAAGGTCCCAAAGGCTGGTATCAGGTCCAGGAGCCGAGCCGCTGGCCCTGATCCGATTAAAAAAGCTATCGTGAAGCGG AAAAAGTCCAACAATTACTTGGTTTGGGTTGCAGCTGCTGCTCTGTTGGTACTGCTTTTGTTGGTGCTTGGTTACACCTATCTTTTCTAAGAAAGTTTAG ATATAGAAGGTGCTTGGTTTTTCAAGGTAACCTTAAGTTACTTCTGTTCTATACATCCTCTTAGGGGAATGGATTAAAATATACTGTTGTTCTTTTAGCT CCTGTTTTGAGAAGTTGCATACATTACATTTTAGTTTGAGTATGGATTTTCAAATTTTGTGGTGGATTTTTACCTGAAACTTTAGTTTGTTTTGTTAGTT AATTATTTAGAGAATTGTAATATGACATACTGAACTTTGTATTCATAAATCTTACATGTTGGTTATGTAGTCTTTTATGATATGATGTTGAACACAATTT GTGACAGGATATATAAGGCTTCAAAATTAAACTAAGCA
• Tissue: pods
• Gene name: LI_gene_169959;
• Additional information: details;

Expression of Ll_transcript_407718

FPKM

• PAB: 11.7
• PNAB: 17
• PS1: 18.5
• PS2: 39
• PS3: 21.9
• PW1: 22.5
• PW2: 28.7
• PW3: 31.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_407718

• Blastp: Proton pump-interactor 1 from Arabidopsis with 49.22% of identity
• Blastx: Proton pump-interactor 1 from Arabidopsis with 53.88% of identity
• Eggnog: proton pump interactor(ENOG4111QP9)
• Kegg: Link to kegg annotations (AT4G27500)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425813.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;