Ll_transcript_406172

• Id Trinity: TRINITY_DN49518_c3_g1_i13
• Name Transcript: Ll_transcript_406172
• Sequence: CTGCTCTAAAAAAATCCGTATTCCTCTCCCCATATATTGGGTGATATTGAATAAAGCAACATAACTAAGGAAGCAGTAGTAAACCAAAAAAACCACAACG TTGGTGTTACCAAACACAGATCCTGTGCGGCAATGCCTCACCGTAACAACCCTACGTCTCTTCCCCTCGTCATCACTCTCAACTGCATCGAAGATTGCTC CCTCGAATTCGATTCCCTCACCGGCGTCGCCGCCGTCGAACACGTACCTCTCAGCCGCTTATCCGACGGCAAGATCGAGTCCGCCTCCGCCATCCTCCTC CACTCCCTCGCCTACCTTCCCCGTGCCGCCCAGCGCCGCCTCCGTCCTTACCACCTAGTCCTCTGCCTTGGCTCCGCCGATCGCGCCGTCGATTCCGCCC TCGCTGCTGACCTCGGACTTCGCCTTGTTCATGTCGATTCGTCACGTGCTGAGGAGATAGCTGATACAGTTATGGCACTGTTCCTTGGTCTTCTTCGCCG GACGCATTTGCTATCGCGGCATTCGCTTTCAGCGTCTGGATGGCTTGGATCGGTGCAGCCGTTGTGCCGTGGGATGAGGCGGTGCCGTGGATTGGTGCTG GGGATTGTTGGTAGATCTGCATCTGCTAGGTCTTTGGCTAATCGGAGCTTAGCGTTCAAAATGAGCGTGCTTTATTTTGATGTTTATCAGGAAAAAGGGA AAGTAAACTTCCCTCCTGCAGCACGAAGAATGGATACTCTAAATGATTTACTTGCCGCAAGCGACCTCATATCACTCCATTGTGCTCTAACAAATGAAAC AATGCAGATTCTAAGTGCTGAATGTCTTCAACATGTAAAGCCTGGAGCTTTTCTTGTAAATACGGGTAGTAGTCAGCTTTTAGATGACTGTGCTGTAAAG CAGCTCTTGATTGATGGAACCTTAGCTGGATGTGCTTTGGATGGTGCAGAAGGGCCCCAATGGATGGAAGCATGGGTTAAGGAGATGCCAAATGTGTTGA TACTTCCACGAAGTGCAGATTACAGTGAAGAAGTTTGGATGGAGATAAGGGAGAAAGCTGTCTCTATATTACAGACATTCTTCATTGATGGTATCATTCC AAAGAATGCCATGTCTGATATGGAAGAAGAAAGTGAGGTGGATGATGAAAACGGACAACGTGATCAAGAATACAGAGAAAATGCTCTGCAGATCATTGTT AGTGAGCAAACAGATGATGTTCACATAAGTCCTGAAAGCTCCCATACGAAAGGAGGTAATCCAGTAAAAGAGTCTTCATCCCAGCACCAGGTTTCAAGTT TGACGCAGAGTATCTCGACTCGATCTGATAGAAGGGGCAGCAGGTCGGGTAAAAAGGCAAAAAAGAGGCATACACATCAGAAGTCCCAACAAAAACTAGA TCCTTCTGCACCAGAGAAAGAAGTCACTTCTCAAAGAGATGATACTGCTATGAGTGGTACTGACCAGGCTTTGAGCTCCAGCTCCGAAGACTCGAGAAGT AGAAAAACTCCAGTAGAATCTATACAAGAACAAACTTCCACTCAAGCTCTAAAGTCTAGCATGAGGGTTAGTGGAAGCTGCACTCAACTTTTGAGAGATG GATATGTTATAGCTCTGTATGCAACAGACTTCCCTGCTCTTCATGTCTCAAGGCAAAGAGTTAAAGGTGGATGTTGGATCCTGGACTCCATGTCAAATGT GACAAAAAGAGACCCTGCTGCACAGTTCCTCATCATCTTCAGAAGCAAGGACACAATTGGATTACGATCTCTTGCTGCTGGTGGAAAGTTACTGCAGATC AATAGAAAAATGGAGTTTGTATTTGCTAGTCATAGTTTTGATGTTTGGGAAAATTGGACACTGGAAGGTTCTTTACAGGAATGTAGACTGGTGAACTGTA GAAATCCAACTGCTGTTTTGGATATACGCATCGAGATTTTGGCAACCGTGGGCGAAGATGGAGTTACTCGTTGGCTTGAATAGACCAGGGCATGAGAATT AGTTTACTTACTCTCCTCTGTCTGTATTTATTAAAAGTACACATTATGAAGGACAATACGCATTATGGAGGAACAATCTTGTGATTGGAAAATAGATAGT AAGTAAAATAATAGTATCTATTATAGAAAGTGCAAAACATGACATTGTTAACCCTTGAATTCTTATAGAAGTGTGATTATTGGTAGTTTTTATGTTGTTC CTTGTAATCTTTGATTGTTATTATTGATGTACGATTATCACATAAATGTGAAGGTATGCATTATAATGAAGAGCATAAACTCAAGATAGTAATATATCTT TG
• Tissue: pods
• Gene name: LI_gene_170018;
• Additional information: details;

Expression of Ll_transcript_406172

FPKM

• PAB: 4.8
• PNAB: 14.2
• PS1: 18.8
• PS2: 6.4
• PS3: 13
• PW1: 14
• PW2: 11.8
• PW3: 6.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_406172

• Blastp: C-terminal binding protein AN from Arabidopsis with 69.79% of identity
• Blastx: C-terminal binding protein AN from Arabidopsis with 69.44% of identity
• Eggnog: Dehydrogenase(COG1052)
• Kegg: Link to kegg annotations (AT1G01510)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460927.1)
• Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain (PF02826.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;