Id Trinity | TRINITY_DN49518_c3_g1_i15 |
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Name Transcript | Ll_transcript_406174 |
Sequence | CTTCATACCCGAACATCCTAGTGGATCCTAACTAGTAGAAAAAAAAGCCTTTATTCCAATTTCTAAAATATTGGGAGACATAGAGTAAATTAAAACAACA CAACTAAAGAGGTAGTAGAAGAGGTGCAAGAGTTGGAGCAGACCACTACCTCATTGCTGCTGCAGTTACCAAACACAGATCCTCTGCGGCAATGCCTCAC CGTAACAACCCTGCGCCTCTTCCCCTCGTCGTCACACTCAACTGCATCGAAGATTCCTCCCTCGAGCTCGACTCCCTCACCGGCGTTGCCGCCGTCGAAC ACGTCCCCCTCAGCCGCTTATCCGACGGCAAGATCGAATCCGCCGCCGCCGTCCTTCTCCACTCCCTCGCTTACCTTCCCCGTGCCGCCCAGCGCCGCCT CCGCCCCGACCACCTCATTCTCTGCCTCGGCTCCGCCGACCCTGCTGTCGATTCCGCCCTTGCTGCTGACCTCGGCCTTCGCCTTGTCCATGTCGATACC TCACGCGCCGAGGAGATAGCTGACACCGTCATGGCCTTGTTCCTCGGCCTCCTTCGCCGGACACACCTGCTCTCGCGGCATTCGCTTTCTGCCTCCGGCT GGCTCGGATCGGTGCAGCCGCTGTGCCGTGGGATGAGGCGGTGCCGTGGGTTGGTTTTGGGAATCGTTGGTAGATCTGCATCTGCTAGGTCTTTGGCCAC TCGTAGTTTGGCTTTCAAAATGAGCGTGCTTTATTTTGATGTTTATTCGCAAAAAGGGAAAGTAAACTTCCCTCGTGCAGCACGAAGAATGGACACCCTT AATGATTTACTTGCCGCAAGCGACCTCATATCACTCCATTGTGCTCTAACAAATGAAACAAATCAGATTCTTAGTGCTGAATGTCTTCAACATATAAAGC CTGGAGCTTTTCTTGTAAATACGGGTAGTAGTCAGCTTTTAGATGACTGTGCTGTAAAGCAGCTCTTGATTGATGGAACCTTAGCTGGATGTGCTTTGGA TGGTGCAGAAGGGCCCCAATGGATGGAAGCATGGGTTAAGGAGATGCCAAATGTGTTGATACTTCCACGAAGTGCAGATTACAGTGAAGAAGTTTGGATG GAGATAAGGGAGAAAGCTGTCTCTATATTACAGACATTCTTCATTGATGGTATCATTCCAAAGAATGCCATGTCTGATATGGAAGAAGAAAGTGAGGTGG ATGATGAAAACGGACAACGTGATCAAGAATACAGAGAAAATGCTCTGCAGATCATTGTTAGTGAGCAAACAGATGATGTTCACATAAGTCCTGAAAGCTC CCATACGAAAGGAGGTAATCCAGTAAAAGAGTCTTCATCCCAGCACCAGGTTTCAAGTTTGACGCAGAGTATCTCGACTCGATCTGATAGAAGGGGCAGC AGGTCGGGTAAAAAGGCAAAAAAGAGGCATACACATCAGAAGTCCCAACAAAAACTAGATCCTTCTGCACCAGAGAAAGAAGTCACTTCTCAAAGAGATG ATACTGCTATGAGTGGTACTGACCAGGCTTTGAGCTCCAGCTCCGAAGACTCGAGAAGTAGAAAAACTCCAGTAGAATCTATACAAGAACAAACTTCCAC TCAAGCTCTAAAGTCTAGCATGAGGGTTAGTGGAAGCTGCACTCAACTTTTGAGAGATGGATATGTTATAGCTCTGTATGCAACAGACTTCCCTGCTCTT CATGTCTCAAGGCAAAGAGTTAAAGGTGGATGTTGGATCCTGGACTCCATGTCAAATGTGACAAAAAGAGACCCTGCTGCACAGTTCCTCATCATCTTCA GAAGCAAGGACACAATTGGATTACGATCTCTTGCTGCTGGTGGAAAGTTACTGCAGATCAATAGAAAAATGGAGTTTGTATTTGCTAGTCATAGTTTTGA TGTTTGGGAAAATTGGACACTGGAAGGTTCTTTACAGGAATGTAGACTGGTGAACTGTAGAAATCCAACTGCTGTTTTGGATATACGCATCGAGATTTTG GCAACCGTGGGCGAAGATGGAGTTACTCGTTGGCTTGAATAGACCAGGGCATGAGAATTAGTTTACTTACTCTCCTCTGTCTGTATTTATTAAAAGTACA CATTATGAAGGACAATACGCATTATGGAGGAACAATCTTGTGATTGGAAAATAGATAGTAAGTAAAATAATAGTATCTATTATAGAAAGTGCAAAACATG ACATTGTTAACCCTTGAATTCTTATAGAAGTGTGATTATTGGTAGTTTTTATGTTGTTCCTTGTAATCTTTGATTGTTATTATTGATGTACGATTATCAC ATAAATGTGAAGGTATGCATTATAATGAAGAGCATAAACTCAAGATAGTAATATATCTTTG BLAST |
Tissue | pods |
Gene name | LI_gene_170018; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_406174
Blastp | C-terminal binding protein AN from Arabidopsis with 70.59% of identity |
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Blastx | C-terminal binding protein AN from Arabidopsis with 70.38% of identity |
Eggnog | Dehydrogenase(COG1052) |
Kegg | Link to kegg annotations (AT1G01510) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433976.1) |
Pfam | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain (PF02826.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |