| Id Trinity | TRINITY_DN49518_c3_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_406175 |
| Sequence | CTTCATACCCGAACATCCTAGTGGATCCTAACTAGTAGAAAAAAAAGCCTTTATTCCAATTTCTAAAATATTGGGAGACATAGAGTAAATTAAAACAACA CAACTAAAGAGGTAGTAGAAGAGGTGCAAGAGTTGGAGCAGACCACTACCTCATTGCTGCTGCAGTTACCAAACACAGATCCTCTGCGGCAATGCCTCAC CGTAACAACCCTGCGCCTCTTCCCCTCGTCGTCACACTCAACTGCATCGAAGATTCCTCCCTCGAGCTCGACTCCCTCACCGGCGTTGCCGCCGTCGAAC ACGTCCCCCTCAGCCGCTTATCCGACGGCAAGATCGAATCCGCCGCCGCCGTCCTTCTCCACTCCCTCGCTTACCTTCCCCGTGCCGCCCAGCGCCGCCT CCGCCCCGACCACCTCATTCTCTGCCTCGGCTCCGCCGACCCTGCTGTCGATTCCGCCCTTGCTGCTGACCTCGGCCTTCGCCTTGTCCATGTCGATACC TCACGCGCCGAGGAGATAGCTGACACCGTCATGGCCTTGTTCCTCGGCCTCCTTCGCCGGACACACCTGCTCTCGCGGCATTCGCTTTCTGCCTCCGGCT GGCTCGGATCGGTGCAGCCGCTGTGCCGTGGGATGAGGCGGTGCCGTGGGTTGGTTTTGGGAATCGTTGGTAGATCTGCATCTGCTAGGTCTTTGGCCAC TCGTAGTTTGGCTTTCAAAATGAGCGTGCTTTATTTTGATGTTTATTCGGTACCTTTTTTCTCCTTTATTTAACCAATTTTTTTTAATAGTTTGAATTTG AAGTGTTCATTAGTGTTTCCTGGTTCGGATTTCATGATTAACATTTCAATTGTGATTCCATGGGTAAACTAGTGATTCTAACATTGACCTTATTTTTTTT TTCATAATTCATTTTATTTTGAAATTTGAGATGATAAATGATGTTTTGTAATTTGAATTTCATGTTTAACGTGTGAATGAGTCGATGACTTGTTTTAAAA AGGGAGCCTTGATCTATATGCGTTGGTCAAGTGGAAGGCGCTTGATCACATAAGCATGTGGTCCTGAATTCGATCTCGGGATAGTGTAAAAGACAGACTT GGTTGGAGTTCTTGCTTAGATGTCTGACCATATCCCGAAAGATTAGTTGCTCACTTATCTGGTGGAAATAAAGTATGGAGACCAAAAAGGGGAGCTTTGG CGCAACTGTTGGAGTTGTGGCCATGTGACTTGTAAGTTGCAGGTTGGAGTTGTTGTAATTAGCCTCGTGCAAATGCAAGTGGTTTAGCTGATTACTGTAG ACCCAGCTGGTTGGTCCAACCGTAGATCCTCACATAACAGGAGCTTTATAGCCCGAGTCTGTCCTTTTTAGTATTTATTCATAACTCCAGAGGCAAATGA AACATTTTTTTTGTTTTTTTAGAGTTTTGGAAGGGTAATTAGTTTTTCCTAGTTCGTCTTTGATGATTAACAGGTTATGTATGAATTGCAAGAGTTGATG ATTTGTTGATATAAATCCCTTTTTGAGTGAAACCGTGGCAATTAACATAGTTCATTCTTACACAAGGCTTCATGTTTACACAATCTATGTACTCTGAAAT ATTTGTTTGTATTGTTTTCTATTCCTTAATATTTGATGAAATATGTCAAACTTTGGTTTAGTGTCCTTGTGCTTCAAATTTTCTGTTTCTCTAATATACA TGTGCATATACACACAACCAATATGAGTCATATAAGTAGTTTTTATTTTTAGTTTTCTGTGAAAAGGGTTGCTGAAGCTGAAGTTTTGTTTGTTACAGTC TTCAACTTATGACTGCGTCTTCCATAACGTGCCATTCTTTGACTTGCATTTTTCGTTTCTTTGGGAGAATGAAAATCATTACCAGCTTACCATGATTTCT AACCAAATCTTGTACTTCCCAAACACCAAGTCTAAACAGCTATCTTTGTGCACAGCAAAAAGGGAAAGTAAACTTCCCTCGTGCAGCACGAAGAATGGAC ACCCTTAATGATTTACTTGCCGCAAGCGACCTCATATCACTCCATTGTGCTCTAACAAATGAAACAAATCAGATTCTTAGTGCTGAATGTCTTCAACATA TAAAGCCTGGAGCTTTTCTTGTAAATACGGGTAGTAGTCAGCTTTTAGATGACTGTGCTGTAAAGCAGCTCTTGATTGATGGAACCTTAGCTGGATGTGC TTTGGATGGTGCAGAAGGGCCCCAATGGATGGAAGCATGGGTTAAGGAGATGCCAAATGTGTTGATACTTCCACGAAGTGCAGATTACAGTGAAGAAGTT TGGATGGAGATAAGGGAGAAAGCTGTCTCTATATTACAGACATTCTTCATTGATGGTATCATTCCAAAGAATGCCATGTCTGATATGGAAGAAGAAAGTG AGGTGGATGATGAAAACGGACAACGTGATCAAGAATACAGAGAAAATGCTCTGCAGATCATTGTTAGTGAGCAAACAGATGATGTTCACATAAGTCCTGA AAGCTCCCATACGAAAGGAGGTAATCCAGTAAAAGAGTCTTCATCCCAGCACCAGGTTTCAAGTTTGACGCAGAGTATCTCGACTCGATCTGATAGAAGG GGCAGCAGGTCGGGTAAAAAGGCAAAAAAGAGGCATACACATCAGAAGTCCCAACAAAAACTAGATCCTTCTGCACCAGAGAAAGAAGTCACTTCTCAAA GAGATGATACTGCTATGAGTGGTACTGACCAGGCTTTGAGCTCCAGCTCCGAAGACTCGAGAAGTAGAAAAACTCCAGTAGAATCTATACAAGAACAAAC TTCCACTCAAGCTCTAAAGTCTAGCATGAGGGTTAGTGGAAGCTGCACTCAACTTTTGAGAGATGGATATGTTATAGCTCTGTATGCAACAGACTTCCCT GCTCTTCATGTCTCAAGGCAAAGAGTTAAAGGTGGATGTTGGATCCTGGACTCCATGTCAAATGTGACAAAAAGAGACCCTGCTGCACAGTTCCTCATCA TCTTCAGAAGCAAGGACACAATTGGATTACGATCTCTTGCTGCTGGTGGAAAGTTACTGCAGATCAATAGAAAAATGGAGTTTGTATTTGCTAGTCATAG TTTTGATGTTTGGGAAAATTGGACACTGGAAGGTTCTTTACAGGAATGTAGACTGGTGAACTGTAGAAATCCAACTGCTGTTTTGGATATACGCATCGAG ATTTTGGCAACCGTGGGCGAAGATGGAGTTACTCGTTGGCTTGAATAGACCAGGGCATGAGAATTAGTTTACTTACTCTCCTCTGTCTGTATTTATTAAA AGTACACATTATGAAGGACAATACGCATTATGGAGGAACAATCTTGTGATTGGAAAATAGATAGTAAGTAAAATAATAGTATCTATTATAGAAAGTGCAA AACATGACATTGTTAACCCTTGAATTCTTATAGAAGTGTGATTATTGGTAGTTTTTATGTTGTTCCTTGTAATCTTTGATTGTTATTATTGATGTACGAT TATCACATAAATGTGAAGGTATGCATTATAATGAAGAGCATAAACTCAAGATAGTAATATATCTTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_170018; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_406175
| Blastp | C-terminal binding protein AN from Arabidopsis with 65.41% of identity |
|---|---|
| Blastx | C-terminal binding protein AN from Arabidopsis with 65.05% of identity |
| Eggnog | Dehydrogenase(COG1052) |
| Kegg | Link to kegg annotations (AT1G01510) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460927.1) |
| Pfam | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain (PF02826.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |