Ll_transcript_405960

Id TrinityTRINITY_DN49522_c5_g1_i1
Name TranscriptLl_transcript_405960
SequenceTGCAAATTCTTCAGATTGGAAGTAATGGAACAACTTTTAAATCTTCACATTTCATCATAAGAACATCCTCGATCTTTTGTATCATCATCTCCGAAAGACA AAATGGGTTTGAAGAAATTCCTAAAACCAATATCAAAACCACAACTTGACTACCACCCTTTACCACCACTCTCTCCAATCCCAAACCCACCGCTTCCATC TCCGCCACCACACACTTCACCTCCTCCTCCATCTCCTCCCACTCTCTCCCTCTCTCCCCTCCCTCACCACCACTTCCACCACCTCCAACTCTTCCTCAAA ACCCATCTCTCCCCTCCCTTCACCCCTCTCTCCCTCCTCCACTTCCTCAAATCCAAGCTCCACCACCACCCTTCCTTTTCCCACTATGACTTTCATATCT TCAATTGGGCATCAAAAATTGATTCTTTCCGCCATACCCATCTCACTTTTCATTGGATGGCACAGACCTTATCCGTAACGCACCGTTTTGATCAACTTAG AACCCTTATTGAGTTCATTGCATCGAATCCTTGTCCGTGTTCTGATGGTACTATATTCTCTTGCCCTCAAATTGAACCTATTTTCAGGTTTGTAATTCAT GGGTATTGTAAAGTTGGGAACTTTGATGATGCCCTTTACGCGTTTCGGACAATGGTTAGGTTGATTGATGGGAGGCCTAGTGTTGTGGTTTGTAATATTT TGCTTCATGGGTTTGTGAAATGTGGGAGGTTTGATAGGGCTTTGGGGTTTTATCATGATGAGATGGTTAGATATAGGGTTAAGCCTGATGTGGTTAGTTT TAATATTTTGATTAGTGGCTATTGTCGTGATTCGCGGTTTGAGTCTGCTTTGGAGATGTTTAAGGAGATGAGGGAAATGGGGTGTGATCCAAATGTGGTT ACTTTTAATACATTGGTTAAGGGGTTGTTTAGAGAGGGGAAGGTTGAGGAAGGGATTGGGATGGTAAATGAGATGATTGAGTTGGGGTACCGGATTTCGG ATGTGACTTGTGAGATTTTGGTGCATGGACTTTGTAAGGAAGGAAGGGTTTTGCAAGCGTGTGAGATGTTGGTGGAGTTGTCGAAAAGGGGAGTTTTGCC AAAAGGGTATGATTATTTTGGTTTGGTGGAAGTTCTGTGTGGGGAAGGACGTGTTGTTAGAGCGTTGGAGCTTATTTATGAGTTATGGGACCGAGGAAGT GTTCCGAGCTTGATTGCTTGTACTGTGATGGTTGATGGTTTAAGTAGATCGGGGAAGAGTGAAGAAGCTTTGAGTTTGGTGGAAAAGATGCTTAAAGAGG GTATGGTATTGGATATTGTGACTTTCAATTGTGTCCTTCAAGATATTTGCAATGTGGGAAGAACAAAAGAAGCGAATAAATTGAGATTACTTGCTTCAAG CAAGGGTTTGGAACTTGATGGCATGACATATAAAATTTTGGTGACTGGGTATACAGAAGAGGGCAATCGAAAGGAGGGAGAGTTAGTGGTAGACGAAATG TTGGATAGAGGATTCATACCTAGTCTTGCTTCATATAATAAATTGATGAATGGATTATCTAATTGCCGACGCTCTACTCTTAAAGTGAACAAATTTGGTT GCTGAAAATACAAGCATTATATTTTACATGGTCATAAATTGACAAGACATGGAGTTCTTGGGTTCAAATTATGGAAACAGCTCCTTAGCTTGCAAGGGTA AGACTGTTTATATCTACCATCCTCATGTCCCATTAGGTGGGAGCCTCGTATACCGGTCGACAACATTGGTTAACGGTTAACGTGATTATGGAATGATTGG GACCAGAGTTATCATATTTCTGTGAAAAAATCAGCTGGAGTATGATTATTTGTTTTGCACAAAGATGAAGGGGCTTGAGTTCATTTATCGGCGTCATTGT ATTACGGCCCGCAGCGTAGCCTCGACGCTGCATTAGATTCGAGGTGATGCAAAACTGAAAATGGAGTTAGGATTCTCTCTAATATAGCAAAGATGCTATA TTGTGTCATCATCTGATCCTTGTTATCAAGACTACAATCAAGAATAACCCTATAACACAGCATAGAGAGAGCATGATCAGTTTCTTTAACACTCCCTGTT GTAACAAACTTCCCAGAAACCTTGTCTTCTATGACACAAATAACATGATCATCTCCAAGGGAACTTAGTTCTCAAAATCGAGATTCAAATTCCTCGTTGG AAACAGGGGTGAAGATCAACTTACTCCAAGAGTAAGTCTTTTTAGGAGTAAAGACTTACTCCTCATCCCAACCATCAATTCCTTGAAAATCCAATGGTTT GAATCTTCCACTAAGTCAAATCATTGGATTTTTCTAAAATTGATGGCTAAGATGAGAAGTAAGTCTTTTAAACTTACTCTTGGAGTAAGTTGATTCCTCC TCGAATCATAAACACTGAATTGTTGCAGTAACTATAAAACCGTTATCTTTGTCTGACATCTCTAGTTTTAGCAATGTAAACCTTTGCTCGTCACTTTGAG TTTGAGTTTGTTGCATATTCTCCAATGCAAAAGTGATTAACGGGAGACATAATCCATTGTAATCAACAATCAAAGATATTAATATATAAGTTTATAG BLAST
Tissuepods
Gene nameLI_gene_170051; 
Additional informationdetails; 

Expression of Ll_transcript_405960

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_405960

BlastpPentatricopeptide repeat-containing protein At2g36240 from Arabidopsis with 52.98% of identity
BlastxPentatricopeptide repeat-containing protein At2g36240 from Arabidopsis with 55.16% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT2G36240)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019424640.1)
PfamPPR repeat (PF01535.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;