Ll_transcript_407049

• Id Trinity: TRINITY_DN49524_c4_g3_i2
• Name Transcript: Ll_transcript_407049
• Sequence: AATATATTGGTACCCTTTATTCTTAGACTCTCATGTGGACTTTGAAGCATGTTAAACAACCCAAGGGGTTAAAAGTTTAGTAGTACATGGGATATGAGAG ATGGATGAGAAAGAACACAACCAAGATCATAACCACCCATCTCTTGTCCCTAACCATAACACCACAAATACCATAACTCCCAAAAAAGAGTCTCTAAGAA AACCTATTATCGGTGGTGATAGGCTGAAGAGAGATGAGTGGAGTGAAGGAGCTGTGTCCACTCTTCTTGAGGCCTATGAAGCCAAATGGGTGCTTAGAAA TAGGGCTAAACTCAAAGGTCAAGACTGGGAAGATGTTGCAAAATATGTTTCATCAAGAGCAAATTCAACCAAATCACCAAAGACACAAACACAGTGCAAA AACAAGATAGAGTCTATGAAGAAAAGGTATAGATCAGAGTCAGCAACTTCAGATGCTTCAACTTGGCCTTTATATTCTCGTCTTGATCTTCTGCTGCGTG GAACTGGGCCAATATCTAGTGTACTCCCACCACCACCAATAGTAGCAGCACCTTCTCAATCACTATACCCTACCAATAATAACCAAGCGTTGATGTTGTT AGAGCCATCACTGGCGGTGTCACAACCACCACCTCCGGCTGCTCCACCACCGCATGCAACTGCACAAAACTCACATGGCTCCAATGGTGTTGATAGATTA GCCAAGGAAGATGGGTTAGGAACTAAGTCATCTGACCAAGTATCTAACAAGAATCCATTGGACACGGATAGTAGCACACCTGCTCTTTACAGTGAAAAGG AGAACATAAGATGCAACAACAAGAAGAAGATGAAAATGGACAGCAACAAACGGCAAAGGAAAGAACACATGGACATAGCAGAAAGTTTAAGGTGGCTAGC TGAAGTTGTTCTAAGATCAGAACAAACAAGAATGGACACAATGAAAGAAATAGAGAGGATGAGGGTTGAAGCTGAGGCCAAGAGAAGTGAAATGGATCTT AAGAGAACTGAAATCATTGCCAATACACAATTAGAGATTGCTAAGATCTTTGCAAGTGTCAATAAAGGTGTTGATTCATCATTAAGAATTGGAAGAAGCT AAGAGTAAATTATGGAACCTCATCCTATGATTCATGAGGATTGAACTTATAAATTATTACCAATATAATATAGGTGAAGATCAATTTAGTTTCAGAGTAA GTCTTTTTAGACTTATTACTCATCTTAGGCATCAATTCATTGAAAATCCAATGATTTGAATTTACCACTAATTCAATCCATTAGATTTCTCTATAATTGA TGTATAAGATAAGAAATAAGTTTTTTAAACTTACTGTTAGAGTAAATTGACTCATCTCCATATAATATATGTCCGAAGGAGAGGGAGACTTATAACTTTG TAATTTGCCTAACTATTCAAGATAGCACCATAAGGTAGCACATTAGAATAATTATCTCTCCTAACTTTTAATTGTAATAACCCTCTCTTCAATTCATTAA CAAATGAAGTTTGTTTCATATATTCTTTGGGTAAGTGTGAGACAAAGCACCATCTTATAATAATAATAATTTTA
• Tissue: pods
• Gene name: LI_gene_170078;
• Additional information: details;

Expression of Ll_transcript_407049

FPKM

• PAB: 2
• PNAB: 6.7
• PS1: 10.6
• PS2: 3.2
• PS3: 7.8
• PW1: 6.2
• PW2: 6.2
• PW3: 5.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_407049

• Blastp: Trihelix transcription factor ASIL2 from Arabidopsis with 24.48% of identity
• Blastx: Trihelix transcription factor ASIL2 from Arabidopsis with 37.74% of identity
• Eggnog: NA(ENOG410Z419)
• Kegg: Link to kegg annotations (AT3G14180)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427397.1)
• Pfam: Myb/SANT-like DNA-binding domain (PF13837.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;