Ll_transcript_406078

• Id Trinity: TRINITY_DN49529_c2_g4_i5
• Name Transcript: Ll_transcript_406078
• Sequence: ACTAAAATACTAAAATGTTTATGTGTTAATTTTTAATTGGTGAGACACGAAATTGAGATATGTTGTCCATGATCTTTGCACGAAATGGTGCTAAAATACT GAAAACGCTTCATTAGCAATGACACCGACCCACTAAGACTAAGGTCAACGAGTATGGATCTATCATCTTTGACATCCAGTTTCCGATCACATAGCTTCCC CTTCTCTTCATCTCTCAAGAAACATCAAATTCAAATTCCAAAATTCAACAGACAACAGAATTCACATGTGAAGGTAATCACAGCAAAGAAAAAGACAAAC TTGGAAGATGTTAGCATCGAGTTGAACGACATTGCTTCTCAGAATCTGGACTTTGCACCTTCCAGGAGACGTGTCCGATCAGCTTTCACTCACGTTCACC AGCAACTTGACCATTGCTTATTCAAGACTGCTCCTGCTGGAATCATAACTCAAGAATGGTACGAAAGGAATTCGAGGGGATTGGAAATTTTCTGCAAAAG CTGGATGCCAGATCCTGGTGTTCCAATGAAGGGAGCTTTGTTTTTCTGCCATGGGTATGGCAGTACTTGCACCTTTTTCTTTGAAGGTACTGCAAAGCGG ATTGCAGGTTCTGGGTATGGTGTTTATGCTATGGACTATCCTGGTTTTGGTCTCTCTGAAGGATTACATGGTCACGTACCAAGTTTTGATGATCTGGTTG ATGACGTTATAGAAATTTTTGCAAAAATTAAAGAAAGGCCTGAAGTCAGAGAGTTGCCTCGATTTATATTAGGGCAGTCGATGGGTGGAGCAGTTGCTCT AAAAGCTCATTTGAAGGAATCAAATGATTGGGATGGAGTAATCCTTGTAGCACCAATGTGTAAAATTGCAGAGGGCATGTTACCATCAACTGCAGTTTTG TCAGCATTAAGTTTCCTGTCCAACGTGGTGCCAAAGGCAAAACTATTCCCTTTCAAAGATATATCTGGGCTGACCTACAGAGAACCAAGCAAGAGAAAAA TGGCGGGCTACAATGTCCTTTCTTATGATGGTAATACAAGGTTAAAAACCGGCATAGAACTTTTGAAGGCCACACAAGATATTGAGTCTCAATTACATAA GGTTTCGGCTCCATTATTGATTCTTCACGGAGCGGAAGATAAGGTGACAGATCCATTAGTGAGTCAATTTCTGTATGAGAAAGCATCTAGTAAGGACAAG ACTCTAAAGATCTATGAAGGAGGTTACCATGGCATTTTGGAAGGGGAAACTGATGAAAGAATTTTTGCTATTCATGATGACATAGTCTCATGGCTTGATT CTAGAGTCAAAAAAATAATGCTTTCATGGTTTTTCAGTTCTCTTAACTCCACGTTTCTCATAGTTGGAAGTGATAAATAAAAGCTAAAAAGTCCATTGAT TAAAAGTACTCTATAAATAAATTCCTATTCATATAAAGTTTGAGGGTTATGAAATATATTTGTGAGGTAGCTCCGAAACTTCCCCTTTTCCTTCATTCGA TTCCTGTTCAAAACTCAACTTGTAAAAAAACTGTAAGGTATATCTGGGAGCTGAGTTTTAGAGGAGAGAAAATAAGGGAAAAGAAGGTTCCGGTATGTAA GTGGGGCAAGCACTTTGTTTGAATATGCAAGGTATGAATGTTCTCCATAAGTTCTTCCTGCAGGCTTCTCACCCCTACACATGGAAACAAATACAAATTC ATAATTTGGTAGTTTATAAGGTAGTGAAGTATGTTCTTTATAAAAATAAGTTATTTGTAGATATTTGGTATATGATTTTATTTTATTAAGTTATTAGGTG TATAAAATCTATTTAATCAGTTACTTGAGGTAGCTTATGAGTTAATAAACAATGATTTATATCACTTGACACTAGTTC
• Tissue: pods
• Gene name: LI_gene_170131;
• Additional information: details;

Expression of Ll_transcript_406078

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.3
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_406078

• Blastp: Caffeoylshikimate esterase from Arabidopsis with 35.17% of identity
• Blastx: Caffeoylshikimate esterase from Arabidopsis with 35.17% of identity
• Eggnog: alpha beta hydrolase fold(COG2267)
• Kegg: Link to kegg annotations (AT1G52760)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426779.1)
• Pfam: Serine aminopeptidase, S33 (PF12146.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;