Ll_transcript_405782

• Id Trinity: TRINITY_DN49537_c2_g3_i1
• Name Transcript: Ll_transcript_405782
• Sequence: AGTAAGAGTGAGAGTGAGGAATTCATTATCATTATCATCATCATCTTCTTCTTCTTCTTCTTCTACAGAAACAAGAAGATATGGACACACCAGAGAGGAA TCAAATCAACGCTCCTCTTAATCCCAACCAGGATTCACCTGTATTCAACTTTATCAACAATTTATCTCCTATCAAACCTGCTAAGCATGCTCCATTTACT CACACTTTCAATTCCCTCGCATTTTCATCGCCTCCCTCTCTTTTCACATCACCACATGTCACATCTCTCAACGAATCCAGATTCTTAAAGAGGCATATCT CTTTACACACACCAAAGGCTAACGATTCATCTCAAAATGTCAATAAAAAATATTCAAATGAAGAGCCTCTTCCCAATTCAACCGAATTACGGGAAAGTAC AAAACAAGGGATATCAATAGCAGACGATGCGATCGAGTTACCACAATCGTTAAAGTATAATTGTGGTAGCCCCGGCTATGCTTCAACATTTTGCGTTGAT GCGGCCAACAACCTTTTGGAGTTGCCTAGGGAGGCAGCACCGGATGTTACCTATGTTCAGGAAGAAGGCTGTAAAACAGACTCAGTTCAGAGCGAAATTC TTCTTCCGGGAACCTGTCAGATTGAGCCTAAGAGTGAATTCCCAGACCGTGGTTGGGATGGGTTAATTCCTGAACACACTGATCTGTTAATTTTTAATTC GCCTGATGAAGCCAGGGCTTTTAATGGCCTATTTCAGAAACCCTTGGACTCTTCTACAGATCTAATGTCGCTGTTACCGCAATCTACAATCATCAATAAT GGCCACAATGTGCAACTTTTTCATTCAATTGCTTCTCGTTCTGAACTTCAAATTGAAGATCAGCATTCTGACCCATTAGCAGCCACAGAAACAGACCATG CGGTGGACAATGCTGCCATGAATAGCAATCCAAATGAGAAAACAGATGATGAGCTTGTTTCTGTGATGCACCGTGGTCTGCGGAGGCGCTGTCTAGACTT TGAGATGGCCAGTGTGCGACAGAAGAACTCAGATGATAATTCAAATACAGTTTTCAGTACTTTACATTCTGATGGGAGGAATGTCACAAATGAAAACCAA CTGGTTCATACAAAACACAATAGTGATTCACGGAAGTGCATTTTGCCGGGAATCGGTTTACACTTGAATGCACTTGCAATCTTAAAAGATCACAATGGCA TAAAACATGAAAGGTTGTCCTCTGGAAGGCAACTCAGTCTGATATGCTCCACTTCTTCATTGAAAATCTCTACAAGCCAAGAACATCATCATCTAGCCAT GAGTGCTGTATCATCTGAAAGAGAAATAGATTCATCAAGCAATGGTGTTCAGCCTGCTGAAGAGTGTCGTGAAGATCTCAATCAGAATAGCCCCAAAAAG AAAAAGCGTAAGTCGGACCTAGCTGGTGAAACCGAGGGCTGCAAGCGTTGTAATTGCAAGAAGTCAAAGTGTTTGAAGCTTTATTGTGAGTGCTTTGCTG CTGGGGTCTACTGCATTGAACCATGTTCTTGTCAGGATTGCTTCAACCAGGCTATTCACGAAGATACTGTTCTTCAAACTCGCAAGCAGATTGAATCTCG TAACCCTCTTGCATTTGCTCCTAAAGTCATCAGAAGTTCCGAGTCTGTTCCGGAAGTTGGGGACGATCCAAATAAAACTCCAGCTTCAGCACGACATAAA AGAGGATGCAACTGCAAGAAATCAAGCTGCCTAAAGAAGTATTGTGAATGTTTTCAGGGTGGTGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGATGCA AAAATGCTTTTGGTAGGAAGGATGGTTCTGCTCTTATAGAAGCTGAACCAGAAGAAGAAACAGAGTCAGGAGAAAAGAGTGTGGCTGAAAAAGATTTACA GAAAACTGAAATTCAGAATATTGAAGATCATTCAGACTCTGCTCTTATCACAACACCATCACTGCTTTCCAGGTTTGATGTGACTTTTTGTTAGTCGAGA GAGTAATATTGATTCACATTGTTTACAATATTTAATTTTTATGCGCAACAGGTCATTGCTTCCATTGCCATTTTCATCCAAGGGAAAGCCACCTAGATCT TTTGTTGCGACCATCTCCGGTTCTGCATTGTTTGCCAGCAGCAGCCAAAAGCTGGAGAAACCAAATTCTCTTTGGTCTCAATCCAAGCATTTTCAAACTG TTCCGGATGATGAAATCCCAGATGTTCTCAGCATTGATATCTCTCCTGTCGCTTGCATCAAAACTTCTTCTCCGAATGGTAAGAGAATCTCTTCTCCTAA CTGTGACTTGGGACCGTCTTCGAGTCGCAGAGGTGGCCGAAAGTTGATCTTACAATCCATTCCTTCATTTCCTTCCCTCACCAATCAGCAGTAGAATGCT GTTATTTTTTTCTTTGTAACTTAGCCCCTAATCCCATCCCCCTCTTTAATCACCATGTTTAGTTTGTAGCTGCATAACCTATGCTTAGGTTTGTGCATAT TGAGCTTTTGTTTACTTTGACAATAATATATCGTGTTGCTTAAGTGATGGTTATAAACTTATAATCATTCCCAAGATTAATCTTTATTCTTTAATGATAT GGTTTTGGACTATTCCATTACTCAAAACTAATAGATTTGTCTTCTACATTAAAAA
• Tissue: pods
• Gene name: LI_gene_170209;
• Additional information: details;

Expression of Ll_transcript_405782

FPKM

• PAB: 0.1
• PNAB: 0.8
• PS1: 0.3
• PS2: 0.2
• PS3: 0.4
• PW1: 0.1
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_405782

• Blastp: Protein tesmin/TSO1-like CXC 2 from Arabidopsis with 43.91% of identity
• Blastx: Protein tesmin/TSO1-like CXC 2 from Arabidopsis with 43.91% of identity
• Eggnog: Tesmin TSO1-like CXC domain containing protein(ENOG4110UR5)
• Kegg: Link to kegg annotations (AT4G14770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422104.1)
• Pfam: Tesmin/TSO1-like CXC domain, cysteine-rich domain (PF03638.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;